Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDM90134.1 | SDN16164.1 | SAMN05216498_0959 | SAMN05216498_1526 | LAO/AO transport system kinase. | methylmalonyl-CoA mutase, C-terminal domain/methylmalonyl-CoA/ethylmalonyl-CoA epimerase. | 0.978 |
SDM90134.1 | SDN16189.1 | SAMN05216498_0959 | SAMN05216498_1527 | LAO/AO transport system kinase. | methylmalonyl-CoA mutase, C-terminal domain. | 0.989 |
SDM90134.1 | SDN16215.1 | SAMN05216498_0959 | SAMN05216498_1528 | LAO/AO transport system kinase. | methylmalonyl-CoA mutase, N-terminal domain. | 0.984 |
SDM90134.1 | icmF | SAMN05216498_0959 | SAMN05216498_0961 | LAO/AO transport system kinase. | methylmalonyl-CoA mutase; Catalyzes the reversible interconversion of isobutyryl-CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly. | 0.968 |
SDN16072.1 | SDN16120.1 | SAMN05216498_1522 | SAMN05216498_1524 | Hypothetical protein. | Tripeptide aminopeptidase. | 0.608 |
SDN16072.1 | SDN16143.1 | SAMN05216498_1522 | SAMN05216498_1525 | Hypothetical protein. | propionyl-CoA carboxylase beta chain. | 0.574 |
SDN16072.1 | SDN16164.1 | SAMN05216498_1522 | SAMN05216498_1526 | Hypothetical protein. | methylmalonyl-CoA mutase, C-terminal domain/methylmalonyl-CoA/ethylmalonyl-CoA epimerase. | 0.574 |
SDN16072.1 | SDN16189.1 | SAMN05216498_1522 | SAMN05216498_1527 | Hypothetical protein. | methylmalonyl-CoA mutase, C-terminal domain. | 0.574 |
SDN16072.1 | SDN16215.1 | SAMN05216498_1522 | SAMN05216498_1528 | Hypothetical protein. | methylmalonyl-CoA mutase, N-terminal domain. | 0.536 |
SDN16072.1 | dinB | SAMN05216498_1522 | SAMN05216498_1523 | Hypothetical protein. | DNA polymerase-4; Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII. | 0.773 |
SDN16120.1 | SDN16072.1 | SAMN05216498_1524 | SAMN05216498_1522 | Tripeptide aminopeptidase. | Hypothetical protein. | 0.608 |
SDN16120.1 | SDN16143.1 | SAMN05216498_1524 | SAMN05216498_1525 | Tripeptide aminopeptidase. | propionyl-CoA carboxylase beta chain. | 0.838 |
SDN16120.1 | SDN16164.1 | SAMN05216498_1524 | SAMN05216498_1526 | Tripeptide aminopeptidase. | methylmalonyl-CoA mutase, C-terminal domain/methylmalonyl-CoA/ethylmalonyl-CoA epimerase. | 0.743 |
SDN16120.1 | SDN16189.1 | SAMN05216498_1524 | SAMN05216498_1527 | Tripeptide aminopeptidase. | methylmalonyl-CoA mutase, C-terminal domain. | 0.743 |
SDN16120.1 | SDN16215.1 | SAMN05216498_1524 | SAMN05216498_1528 | Tripeptide aminopeptidase. | methylmalonyl-CoA mutase, N-terminal domain. | 0.714 |
SDN16120.1 | dinB | SAMN05216498_1524 | SAMN05216498_1523 | Tripeptide aminopeptidase. | DNA polymerase-4; Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII. | 0.631 |
SDN16143.1 | SDN16072.1 | SAMN05216498_1525 | SAMN05216498_1522 | propionyl-CoA carboxylase beta chain. | Hypothetical protein. | 0.574 |
SDN16143.1 | SDN16120.1 | SAMN05216498_1525 | SAMN05216498_1524 | propionyl-CoA carboxylase beta chain. | Tripeptide aminopeptidase. | 0.838 |
SDN16143.1 | SDN16164.1 | SAMN05216498_1525 | SAMN05216498_1526 | propionyl-CoA carboxylase beta chain. | methylmalonyl-CoA mutase, C-terminal domain/methylmalonyl-CoA/ethylmalonyl-CoA epimerase. | 0.976 |
SDN16143.1 | SDN16189.1 | SAMN05216498_1525 | SAMN05216498_1527 | propionyl-CoA carboxylase beta chain. | methylmalonyl-CoA mutase, C-terminal domain. | 0.851 |
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