Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDN02321.1 | SDN22098.1 | SAMN05216498_1183 | SAMN05216498_1749 | DNA processing protein. | DNA repair protein RadC; Belongs to the UPF0758 family. | 0.501 |
SDN02321.1 | SDO02652.1 | SAMN05216498_1183 | SAMN05216498_0481 | DNA processing protein. | Competence protein ComFC. | 0.843 |
SDN02321.1 | cinA | SAMN05216498_1183 | SAMN05216498_1100 | DNA processing protein. | Nicotinamide-nucleotide amidase; Belongs to the CinA family. | 0.496 |
SDN22014.1 | SDN22040.1 | SAMN05216498_1746 | SAMN05216498_1747 | Rod shape-determining protein MreD. | Rod shape-determining protein MreC; Involved in formation and maintenance of cell shape. | 0.995 |
SDN22014.1 | SDN22068.1 | SAMN05216498_1746 | SAMN05216498_1748 | Rod shape-determining protein MreD. | Rod shape-determining protein MreB. | 0.897 |
SDN22014.1 | SDN22098.1 | SAMN05216498_1746 | SAMN05216498_1749 | Rod shape-determining protein MreD. | DNA repair protein RadC; Belongs to the UPF0758 family. | 0.538 |
SDN22040.1 | SDN22014.1 | SAMN05216498_1747 | SAMN05216498_1746 | Rod shape-determining protein MreC; Involved in formation and maintenance of cell shape. | Rod shape-determining protein MreD. | 0.995 |
SDN22040.1 | SDN22068.1 | SAMN05216498_1747 | SAMN05216498_1748 | Rod shape-determining protein MreC; Involved in formation and maintenance of cell shape. | Rod shape-determining protein MreB. | 0.991 |
SDN22040.1 | SDN22098.1 | SAMN05216498_1747 | SAMN05216498_1749 | Rod shape-determining protein MreC; Involved in formation and maintenance of cell shape. | DNA repair protein RadC; Belongs to the UPF0758 family. | 0.819 |
SDN22040.1 | SDN85566.1 | SAMN05216498_1747 | SAMN05216498_0055 | Rod shape-determining protein MreC; Involved in formation and maintenance of cell shape. | Septum formation protein; Nucleoside triphosphate pyrophosphatase that hydrolyzes dTTP and UTP. May have a dual role in cell division arrest and in preventing the incorporation of modified nucleotides into cellular nucleic acids. | 0.661 |
SDN22068.1 | SDN22014.1 | SAMN05216498_1748 | SAMN05216498_1746 | Rod shape-determining protein MreB. | Rod shape-determining protein MreD. | 0.897 |
SDN22068.1 | SDN22040.1 | SAMN05216498_1748 | SAMN05216498_1747 | Rod shape-determining protein MreB. | Rod shape-determining protein MreC; Involved in formation and maintenance of cell shape. | 0.991 |
SDN22068.1 | SDN22098.1 | SAMN05216498_1748 | SAMN05216498_1749 | Rod shape-determining protein MreB. | DNA repair protein RadC; Belongs to the UPF0758 family. | 0.615 |
SDN22098.1 | SDN02321.1 | SAMN05216498_1749 | SAMN05216498_1183 | DNA repair protein RadC; Belongs to the UPF0758 family. | DNA processing protein. | 0.501 |
SDN22098.1 | SDN22014.1 | SAMN05216498_1749 | SAMN05216498_1746 | DNA repair protein RadC; Belongs to the UPF0758 family. | Rod shape-determining protein MreD. | 0.538 |
SDN22098.1 | SDN22040.1 | SAMN05216498_1749 | SAMN05216498_1747 | DNA repair protein RadC; Belongs to the UPF0758 family. | Rod shape-determining protein MreC; Involved in formation and maintenance of cell shape. | 0.819 |
SDN22098.1 | SDN22068.1 | SAMN05216498_1749 | SAMN05216498_1748 | DNA repair protein RadC; Belongs to the UPF0758 family. | Rod shape-determining protein MreB. | 0.615 |
SDN22098.1 | SDN22128.1 | SAMN05216498_1749 | SAMN05216498_1750 | DNA repair protein RadC; Belongs to the UPF0758 family. | Hypothetical protein. | 0.495 |
SDN22098.1 | SDN85566.1 | SAMN05216498_1749 | SAMN05216498_0055 | DNA repair protein RadC; Belongs to the UPF0758 family. | Septum formation protein; Nucleoside triphosphate pyrophosphatase that hydrolyzes dTTP and UTP. May have a dual role in cell division arrest and in preventing the incorporation of modified nucleotides into cellular nucleic acids. | 0.706 |
SDN22098.1 | SDO02652.1 | SAMN05216498_1749 | SAMN05216498_0481 | DNA repair protein RadC; Belongs to the UPF0758 family. | Competence protein ComFC. | 0.729 |
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