Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDN25383.1 | SDN25569.1 | SAMN05216498_1865 | SAMN05216498_1871 | Sporulation protein YtfJ. | Uncharacterized membrane protein YcaP, DUF421 family. | 0.556 |
SDN25531.1 | SDN25569.1 | SAMN05216498_1870 | SAMN05216498_1871 | Protein of unknown function. | Uncharacterized membrane protein YcaP, DUF421 family. | 0.707 |
SDN25569.1 | SDN25383.1 | SAMN05216498_1871 | SAMN05216498_1865 | Uncharacterized membrane protein YcaP, DUF421 family. | Sporulation protein YtfJ. | 0.556 |
SDN25569.1 | SDN25531.1 | SAMN05216498_1871 | SAMN05216498_1870 | Uncharacterized membrane protein YcaP, DUF421 family. | Protein of unknown function. | 0.707 |
SDN25569.1 | SDN25607.1 | SAMN05216498_1871 | SAMN05216498_1872 | Uncharacterized membrane protein YcaP, DUF421 family. | Protein of unknown function. | 0.550 |
SDN25569.1 | SDN25648.1 | SAMN05216498_1871 | SAMN05216498_1873 | Uncharacterized membrane protein YcaP, DUF421 family. | Short-chain dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | 0.421 |
SDN25607.1 | SDN25569.1 | SAMN05216498_1872 | SAMN05216498_1871 | Protein of unknown function. | Uncharacterized membrane protein YcaP, DUF421 family. | 0.550 |
SDN25607.1 | SDN25648.1 | SAMN05216498_1872 | SAMN05216498_1873 | Protein of unknown function. | Short-chain dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | 0.553 |
SDN25648.1 | SDN25569.1 | SAMN05216498_1873 | SAMN05216498_1871 | Short-chain dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | Uncharacterized membrane protein YcaP, DUF421 family. | 0.421 |
SDN25648.1 | SDN25607.1 | SAMN05216498_1873 | SAMN05216498_1872 | Short-chain dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | Protein of unknown function. | 0.553 |