Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDM88477.1 | SDN27571.1 | SAMN05216498_0907 | SAMN05216498_1928 | LPXTG-motif cell wall anchor domain-containing protein. | Hypothetical protein. | 0.653 |
SDM88477.1 | SDN28462.1 | SAMN05216498_0907 | SAMN05216498_1953 | LPXTG-motif cell wall anchor domain-containing protein. | Gas vesicle protein. | 0.428 |
SDM88477.1 | SDN37582.1 | SAMN05216498_0907 | SAMN05216498_2101 | LPXTG-motif cell wall anchor domain-containing protein. | RNA polymerase sigma factor, sigma-70 family; Belongs to the sigma-70 factor family. ECF subfamily. | 0.493 |
SDM88477.1 | SDN86808.1 | SAMN05216498_0907 | SAMN05216498_0095 | LPXTG-motif cell wall anchor domain-containing protein. | Sporulation lipoprotein, YhcN/YlaJ family. | 0.485 |
SDN01921.1 | SDN06603.1 | SAMN05216498_1168 | SAMN05216498_1332 | Hook-length control protein FliK. | Putative cell-wall binding lipoprotein. | 0.700 |
SDN01921.1 | SDN21304.1 | SAMN05216498_1168 | SAMN05216498_1720 | Hook-length control protein FliK. | Post-transcriptional regulator. | 0.752 |
SDN01921.1 | SDN27571.1 | SAMN05216498_1168 | SAMN05216498_1928 | Hook-length control protein FliK. | Hypothetical protein. | 0.726 |
SDN01921.1 | SDN28462.1 | SAMN05216498_1168 | SAMN05216498_1953 | Hook-length control protein FliK. | Gas vesicle protein. | 0.611 |
SDN01921.1 | SDN28675.1 | SAMN05216498_1168 | SAMN05216498_1960 | Hook-length control protein FliK. | Putative zincin peptidase. | 0.484 |
SDN01921.1 | SDN37582.1 | SAMN05216498_1168 | SAMN05216498_2101 | Hook-length control protein FliK. | RNA polymerase sigma factor, sigma-70 family; Belongs to the sigma-70 factor family. ECF subfamily. | 0.599 |
SDN06603.1 | SDN01921.1 | SAMN05216498_1332 | SAMN05216498_1168 | Putative cell-wall binding lipoprotein. | Hook-length control protein FliK. | 0.700 |
SDN06603.1 | SDN21304.1 | SAMN05216498_1332 | SAMN05216498_1720 | Putative cell-wall binding lipoprotein. | Post-transcriptional regulator. | 0.630 |
SDN06603.1 | SDN27571.1 | SAMN05216498_1332 | SAMN05216498_1928 | Putative cell-wall binding lipoprotein. | Hypothetical protein. | 0.719 |
SDN06603.1 | SDN28675.1 | SAMN05216498_1332 | SAMN05216498_1960 | Putative cell-wall binding lipoprotein. | Putative zincin peptidase. | 0.447 |
SDN21304.1 | SDN01921.1 | SAMN05216498_1720 | SAMN05216498_1168 | Post-transcriptional regulator. | Hook-length control protein FliK. | 0.752 |
SDN21304.1 | SDN06603.1 | SAMN05216498_1720 | SAMN05216498_1332 | Post-transcriptional regulator. | Putative cell-wall binding lipoprotein. | 0.630 |
SDN21304.1 | SDN27571.1 | SAMN05216498_1720 | SAMN05216498_1928 | Post-transcriptional regulator. | Hypothetical protein. | 0.658 |
SDN21304.1 | SDN28462.1 | SAMN05216498_1720 | SAMN05216498_1953 | Post-transcriptional regulator. | Gas vesicle protein. | 0.478 |
SDN21304.1 | SDN37582.1 | SAMN05216498_1720 | SAMN05216498_2101 | Post-transcriptional regulator. | RNA polymerase sigma factor, sigma-70 family; Belongs to the sigma-70 factor family. ECF subfamily. | 0.716 |
SDN21304.1 | SDN86808.1 | SAMN05216498_1720 | SAMN05216498_0095 | Post-transcriptional regulator. | Sporulation lipoprotein, YhcN/YlaJ family. | 0.401 |
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