Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDM82016.1 | SDM90340.1 | SAMN05216498_0684 | SAMN05216498_0965 | Glucokinase. | Fructose-bisphosphate aldolase, class II. | 0.587 |
SDM82016.1 | SDN24750.1 | SAMN05216498_0684 | SAMN05216498_1845 | Glucokinase. | Pyruvate kinase; Belongs to the pyruvate kinase family. | 0.635 |
SDM82016.1 | SDN34126.1 | SAMN05216498_0684 | SAMN05216498_1982 | Glucokinase. | Pseudouridine kinase. | 0.781 |
SDM90340.1 | SDM82016.1 | SAMN05216498_0965 | SAMN05216498_0684 | Fructose-bisphosphate aldolase, class II. | Glucokinase. | 0.587 |
SDM90340.1 | SDN19071.1 | SAMN05216498_0965 | SAMN05216498_1640 | Fructose-bisphosphate aldolase, class II. | CBS domain-containing protein. | 0.450 |
SDM90340.1 | SDN24750.1 | SAMN05216498_0965 | SAMN05216498_1845 | Fructose-bisphosphate aldolase, class II. | Pyruvate kinase; Belongs to the pyruvate kinase family. | 0.943 |
SDM90340.1 | SDN34126.1 | SAMN05216498_0965 | SAMN05216498_1982 | Fructose-bisphosphate aldolase, class II. | Pseudouridine kinase. | 0.799 |
SDM90340.1 | SDN48367.1 | SAMN05216498_0965 | SAMN05216498_2363 | Fructose-bisphosphate aldolase, class II. | Glucokinase. | 0.587 |
SDN19071.1 | SDM90340.1 | SAMN05216498_1640 | SAMN05216498_0965 | CBS domain-containing protein. | Fructose-bisphosphate aldolase, class II. | 0.450 |
SDN19071.1 | SDN24750.1 | SAMN05216498_1640 | SAMN05216498_1845 | CBS domain-containing protein. | Pyruvate kinase; Belongs to the pyruvate kinase family. | 0.522 |
SDN19071.1 | SDN34126.1 | SAMN05216498_1640 | SAMN05216498_1982 | CBS domain-containing protein. | Pseudouridine kinase. | 0.801 |
SDN19071.1 | birA | SAMN05216498_1640 | SAMN05216498_2661 | CBS domain-containing protein. | Bifunctional ligase/repressor BirA; Acts both as a biotin--[acetyl-CoA-carboxylase] ligase and a repressor; Belongs to the biotin--protein ligase family. | 0.476 |
SDN19071.1 | guaA | SAMN05216498_1640 | SAMN05216498_1631 | CBS domain-containing protein. | GMP synthase (glutamine-hydrolysing); Catalyzes the synthesis of GMP from XMP. | 0.930 |
SDN19071.1 | purA | SAMN05216498_1640 | SAMN05216498_0638 | CBS domain-containing protein. | Adenylosuccinate synthase; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belongs to the adenylosuccinate synthetase family. | 0.500 |
SDN22357.1 | SDN34126.1 | SAMN05216498_1758 | SAMN05216498_1982 | uroporphyrinogen-III synthase; Catalyzes cyclization of the linear tetrapyrrole, hydroxymethylbilane, to the macrocyclic uroporphyrinogen III. | Pseudouridine kinase. | 0.775 |
SDN22357.1 | birA | SAMN05216498_1758 | SAMN05216498_2661 | uroporphyrinogen-III synthase; Catalyzes cyclization of the linear tetrapyrrole, hydroxymethylbilane, to the macrocyclic uroporphyrinogen III. | Bifunctional ligase/repressor BirA; Acts both as a biotin--[acetyl-CoA-carboxylase] ligase and a repressor; Belongs to the biotin--protein ligase family. | 0.508 |
SDN24750.1 | SDM82016.1 | SAMN05216498_1845 | SAMN05216498_0684 | Pyruvate kinase; Belongs to the pyruvate kinase family. | Glucokinase. | 0.635 |
SDN24750.1 | SDM90340.1 | SAMN05216498_1845 | SAMN05216498_0965 | Pyruvate kinase; Belongs to the pyruvate kinase family. | Fructose-bisphosphate aldolase, class II. | 0.943 |
SDN24750.1 | SDN19071.1 | SAMN05216498_1845 | SAMN05216498_1640 | Pyruvate kinase; Belongs to the pyruvate kinase family. | CBS domain-containing protein. | 0.522 |
SDN24750.1 | SDN34126.1 | SAMN05216498_1845 | SAMN05216498_1982 | Pyruvate kinase; Belongs to the pyruvate kinase family. | Pseudouridine kinase. | 0.788 |
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