Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDN34975.1 | SDN35001.1 | SAMN05216498_2009 | SAMN05216498_2010 | Iron complex transport system substrate-binding protein. | Iron complex transport system permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily. | 0.964 |
SDN34975.1 | SDN35026.1 | SAMN05216498_2009 | SAMN05216498_2011 | Iron complex transport system substrate-binding protein. | Iron complex transport system permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily. | 0.960 |
SDN34975.1 | SDN35060.1 | SAMN05216498_2009 | SAMN05216498_2012 | Iron complex transport system substrate-binding protein. | Ferric iron reductase FhuF-like transporter. | 0.524 |
SDN35001.1 | SDN34975.1 | SAMN05216498_2010 | SAMN05216498_2009 | Iron complex transport system permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily. | Iron complex transport system substrate-binding protein. | 0.964 |
SDN35001.1 | SDN35026.1 | SAMN05216498_2010 | SAMN05216498_2011 | Iron complex transport system permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily. | Iron complex transport system permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily. | 0.929 |
SDN35001.1 | SDN35060.1 | SAMN05216498_2010 | SAMN05216498_2012 | Iron complex transport system permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily. | Ferric iron reductase FhuF-like transporter. | 0.707 |
SDN35001.1 | SDN35090.1 | SAMN05216498_2010 | SAMN05216498_2013 | Iron complex transport system permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily. | Hypothetical protein. | 0.479 |
SDN35001.1 | SDN35117.1 | SAMN05216498_2010 | SAMN05216498_2014 | Iron complex transport system permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily. | Hypothetical protein. | 0.479 |
SDN35001.1 | SDN35198.1 | SAMN05216498_2010 | SAMN05216498_2015 | Iron complex transport system permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily. | Tetratricopeptide repeat-containing protein. | 0.460 |
SDN35001.1 | SDN35217.1 | SAMN05216498_2010 | SAMN05216498_2016 | Iron complex transport system permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily. | Protein of unknown function. | 0.454 |
SDN35026.1 | SDN34975.1 | SAMN05216498_2011 | SAMN05216498_2009 | Iron complex transport system permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily. | Iron complex transport system substrate-binding protein. | 0.960 |
SDN35026.1 | SDN35001.1 | SAMN05216498_2011 | SAMN05216498_2010 | Iron complex transport system permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily. | Iron complex transport system permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily. | 0.929 |
SDN35026.1 | SDN35060.1 | SAMN05216498_2011 | SAMN05216498_2012 | Iron complex transport system permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily. | Ferric iron reductase FhuF-like transporter. | 0.707 |
SDN35026.1 | SDN35090.1 | SAMN05216498_2011 | SAMN05216498_2013 | Iron complex transport system permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily. | Hypothetical protein. | 0.479 |
SDN35026.1 | SDN35117.1 | SAMN05216498_2011 | SAMN05216498_2014 | Iron complex transport system permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily. | Hypothetical protein. | 0.479 |
SDN35026.1 | SDN35198.1 | SAMN05216498_2011 | SAMN05216498_2015 | Iron complex transport system permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily. | Tetratricopeptide repeat-containing protein. | 0.460 |
SDN35026.1 | SDN35217.1 | SAMN05216498_2011 | SAMN05216498_2016 | Iron complex transport system permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily. | Protein of unknown function. | 0.454 |
SDN35060.1 | SDN34975.1 | SAMN05216498_2012 | SAMN05216498_2009 | Ferric iron reductase FhuF-like transporter. | Iron complex transport system substrate-binding protein. | 0.524 |
SDN35060.1 | SDN35001.1 | SAMN05216498_2012 | SAMN05216498_2010 | Ferric iron reductase FhuF-like transporter. | Iron complex transport system permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily. | 0.707 |
SDN35060.1 | SDN35026.1 | SAMN05216498_2012 | SAMN05216498_2011 | Ferric iron reductase FhuF-like transporter. | Iron complex transport system permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily. | 0.707 |
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