STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDN38980.1DNA-binding transcriptional regulator, ArsR family. (259 aa)    
Predicted Functional Partners:
SDN38954.1
Catechol 2,3-dioxygenase.
  
    0.779
SDN40669.1
DNA-binding transcriptional regulator, ArsR family.
 
    0.764
SDN40686.1
Uncharacterized conserved protein YndB, AHSA1/START domain.
 
    0.734
SDN35587.1
PhnB protein.
 
    0.656
SDN74685.1
DNA-binding transcriptional regulator, ArsR family.
 
    0.649
SDN39004.1
Ubiquinone/menaquinone biosynthesis C-methylase UbiE.
 
     0.562
SDN93390.1
RNA polymerase sigma factor, sigma-70 family.
 
     0.559
SDN08268.1
Uncharacterized conserved protein YtfP, gamma-glutamylcyclotransferase (GGCT)/AIG2-like family.
    
  0.505
SDN07547.1
Glutathione peroxidase; Belongs to the glutathione peroxidase family.
    
  0.504
SDN42315.1
Glutaredoxin.
    
 0.471
Your Current Organism:
Tenuibacillus multivorans
NCBI taxonomy Id: 237069
Other names: AS 1.3442, CGMCC 1.3442, NBRC 100370, T. multivorans, Tenuibacillus multivorans Ren and Zhou 2005, cf. Filobacillus sp. 1, strain 28-1
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