Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDM82417.1 | SDN40107.1 | SAMN05216498_0698 | SAMN05216498_2199 | Acyl dehydratase. | Catalase; Belongs to the catalase family. | 0.531 |
SDM82417.1 | SDN57511.1 | SAMN05216498_0698 | SAMN05216498_2546 | Acyl dehydratase. | Catalase; Serves to protect cells from the toxic effects of hydrogen peroxide. | 0.542 |
SDN08499.1 | SDN40107.1 | SAMN05216498_1405 | SAMN05216498_2199 | Acyl dehydratase. | Catalase; Belongs to the catalase family. | 0.531 |
SDN08499.1 | SDN57511.1 | SAMN05216498_1405 | SAMN05216498_2546 | Acyl dehydratase. | Catalase; Serves to protect cells from the toxic effects of hydrogen peroxide. | 0.542 |
SDN18495.1 | SDN40107.1 | SAMN05216498_1617 | SAMN05216498_2199 | Superoxide dismutase, Fe-Mn family; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family. | Catalase; Belongs to the catalase family. | 0.572 |
SDN18495.1 | SDN51531.1 | SAMN05216498_1617 | SAMN05216498_2465 | Superoxide dismutase, Fe-Mn family; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family. | Peroxiredoxin (alkyl hydroperoxide reductase subunit C); Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides. | 0.466 |
SDN18495.1 | SDN57511.1 | SAMN05216498_1617 | SAMN05216498_2546 | Superoxide dismutase, Fe-Mn family; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family. | Catalase; Serves to protect cells from the toxic effects of hydrogen peroxide. | 0.743 |
SDN18495.1 | msrA | SAMN05216498_1617 | SAMN05216498_2614 | Superoxide dismutase, Fe-Mn family; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family. | Peptide-methionine (S)-S-oxide reductase; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine. | 0.513 |
SDN18495.1 | msrA-2 | SAMN05216498_1617 | SAMN05216498_2622 | Superoxide dismutase, Fe-Mn family; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family. | Peptide methionine sulfoxide reductase msrA/msrB; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine. | 0.513 |
SDN40078.1 | SDN40107.1 | SAMN05216498_2198 | SAMN05216498_2199 | Hypothetical protein. | Catalase; Belongs to the catalase family. | 0.501 |
SDN40107.1 | SDM82417.1 | SAMN05216498_2199 | SAMN05216498_0698 | Catalase; Belongs to the catalase family. | Acyl dehydratase. | 0.531 |
SDN40107.1 | SDN08499.1 | SAMN05216498_2199 | SAMN05216498_1405 | Catalase; Belongs to the catalase family. | Acyl dehydratase. | 0.531 |
SDN40107.1 | SDN18495.1 | SAMN05216498_2199 | SAMN05216498_1617 | Catalase; Belongs to the catalase family. | Superoxide dismutase, Fe-Mn family; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family. | 0.572 |
SDN40107.1 | SDN40078.1 | SAMN05216498_2199 | SAMN05216498_2198 | Catalase; Belongs to the catalase family. | Hypothetical protein. | 0.501 |
SDN40107.1 | SDN40134.1 | SAMN05216498_2199 | SAMN05216498_2200 | Catalase; Belongs to the catalase family. | 2-iminobutanoate/2-iminopropanoate deaminase. | 0.446 |
SDN40107.1 | SDN51531.1 | SAMN05216498_2199 | SAMN05216498_2465 | Catalase; Belongs to the catalase family. | Peroxiredoxin (alkyl hydroperoxide reductase subunit C); Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides. | 0.697 |
SDN40107.1 | SDN57511.1 | SAMN05216498_2199 | SAMN05216498_2546 | Catalase; Belongs to the catalase family. | Catalase; Serves to protect cells from the toxic effects of hydrogen peroxide. | 0.726 |
SDN40107.1 | SDN59502.1 | SAMN05216498_2199 | SAMN05216498_2608 | Catalase; Belongs to the catalase family. | Superoxide dismutase, Fe-Mn family. | 0.572 |
SDN40107.1 | msrA | SAMN05216498_2199 | SAMN05216498_2614 | Catalase; Belongs to the catalase family. | Peptide-methionine (S)-S-oxide reductase; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine. | 0.588 |
SDN40107.1 | msrA-2 | SAMN05216498_2199 | SAMN05216498_2622 | Catalase; Belongs to the catalase family. | Peptide methionine sulfoxide reductase msrA/msrB; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine. | 0.588 |
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