STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDN42518.1Outer membrane lipoprotein-sorting protein. (339 aa)    
Predicted Functional Partners:
SDM84906.1
Bacitracin transport system permease protein.
 
 
 
 0.847
SDM84932.1
Bacitracin transport system ATP-binding protein.
   
 
 0.846
SDN91661.1
N-acetylmuramoyl-L-alanine amidase.
    
   0.836
SDN17261.1
Stage III sporulation protein AH.
  
    0.777
SDM89248.1
Spore coat protein GerQ.
  
     0.775
SDM99776.1
Spore coat protein E.
  
     0.775
SDM89281.1
N-acetylmuramoyl-L-alanine amidase.
  
     0.774
SDN05086.1
Transcription factor, RsfA family.
  
     0.774
SDN21045.1
Prespore-specific regulator.
  
     0.774
SDN91722.1
Spore germination protein D.
  
     0.773
Your Current Organism:
Tenuibacillus multivorans
NCBI taxonomy Id: 237069
Other names: AS 1.3442, CGMCC 1.3442, NBRC 100370, T. multivorans, Tenuibacillus multivorans Ren and Zhou 2005, cf. Filobacillus sp. 1, strain 28-1
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