STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDN47377.1Predicted arabinose efflux permease, MFS family. (387 aa)    
Predicted Functional Partners:
SDN47307.1
Putative tricarboxylic transport membrane protein.
 
     0.669
SDN47335.1
Hypothetical protein.
       0.651
SDN50329.1
Tripartite tricarboxylate transporter TctB family protein.
  
     0.592
SDN47272.1
Tripartite tricarboxylate transporter TctB family protein.
       0.583
SDN47240.1
Putative tricarboxylic transport membrane protein.
 
     0.531
SDN50422.1
Regulator of RNase E activity RraA.
  
     0.488
SDN69260.1
Hypothetical protein.
  
     0.462
SDN93540.1
DNA-binding transcriptional regulator, ArsR family.
  
     0.432
Your Current Organism:
Tenuibacillus multivorans
NCBI taxonomy Id: 237069
Other names: AS 1.3442, CGMCC 1.3442, NBRC 100370, T. multivorans, Tenuibacillus multivorans Ren and Zhou 2005, cf. Filobacillus sp. 1, strain 28-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.