STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDN59283.1D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 5/6); Belongs to the peptidase S11 family. (384 aa)    
Predicted Functional Partners:
SDN04828.1
Penicillin-binding protein 2B.
 
 
 0.735
SDN60185.1
Putative peptidoglycan binding domain-containing protein.
  
 
 0.699
SDM79589.1
D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 5/6); Belongs to the peptidase S11 family.
 
  
 
0.641
SDN63409.1
D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 5/6); Belongs to the peptidase S11 family.
 
  
 
0.630
SDN87224.1
D-alanyl-D-alanine carboxypeptidase.
     
 0.527
SDN59251.1
Protein of unknown function.
       0.504
SDN59309.1
Zn-finger domain of CDGSH type-containing protein.
       0.488
SDN62840.1
Spore maturation protein B.
  
  
 0.444
SDN62866.1
Spore maturation protein A.
  
  
 0.440
SDN18426.1
Cell division protein FtsI/penicillin-binding protein 2.
 
 
 0.424
Your Current Organism:
Tenuibacillus multivorans
NCBI taxonomy Id: 237069
Other names: AS 1.3442, CGMCC 1.3442, NBRC 100370, T. multivorans, Tenuibacillus multivorans Ren and Zhou 2005, cf. Filobacillus sp. 1, strain 28-1
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