Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| SDM77378.1 | SDN04483.1 | SAMN05216498_0542 | SAMN05216498_1255 | Spore cortex biosynthesis protein YabQ. | Stage II sporulation protein GA (sporulation sigma-E factor processing peptidase); Probable aspartic protease that is responsible for the proteolytic cleavage of the RNA polymerase sigma E factor (SigE/spoIIGB) to yield the active peptide in the mother cell during sporulation. Responds to a signal from the forespore that is triggered by the extracellular signal protein SpoIIR. | 0.709 |
| SDM77378.1 | SDN06167.1 | SAMN05216498_0542 | SAMN05216498_1315 | Spore cortex biosynthesis protein YabQ. | Sporulation lipoprotein, YhcN/YlaJ family. | 0.548 |
| SDM77378.1 | SDN18460.1 | SAMN05216498_0542 | SAMN05216498_1616 | Spore cortex biosynthesis protein YabQ. | MFS transporter, YQGE family, putative transporter. | 0.770 |
| SDM77378.1 | SDN18653.1 | SAMN05216498_0542 | SAMN05216498_1626 | Spore cortex biosynthesis protein YabQ. | Hypothetical protein. | 0.619 |
| SDM77378.1 | SDN22269.1 | SAMN05216498_0542 | SAMN05216498_1755 | Spore cortex biosynthesis protein YabQ. | Stage VI sporulation protein D. | 0.773 |
| SDM77378.1 | SDN60596.1 | SAMN05216498_0542 | SAMN05216498_2648 | Spore cortex biosynthesis protein YabQ. | Protein of unknown function. | 0.667 |
| SDM77378.1 | SDN61742.1 | SAMN05216498_0542 | SAMN05216498_2684 | Spore cortex biosynthesis protein YabQ. | Heptaprenyl diphosphate synthase (HEPPP synthase) subunit 1. | 0.537 |
| SDM77378.1 | SDN98326.1 | SAMN05216498_0542 | SAMN05216498_0377 | Spore cortex biosynthesis protein YabQ. | Uncharacterized protein YunC, DUF1805 family. | 0.533 |
| SDM88477.1 | SDN06167.1 | SAMN05216498_0907 | SAMN05216498_1315 | LPXTG-motif cell wall anchor domain-containing protein. | Sporulation lipoprotein, YhcN/YlaJ family. | 0.529 |
| SDM88477.1 | SDN18653.1 | SAMN05216498_0907 | SAMN05216498_1626 | LPXTG-motif cell wall anchor domain-containing protein. | Hypothetical protein. | 0.539 |
| SDM88477.1 | SDN60596.1 | SAMN05216498_0907 | SAMN05216498_2648 | LPXTG-motif cell wall anchor domain-containing protein. | Protein of unknown function. | 0.700 |
| SDN04483.1 | SDM77378.1 | SAMN05216498_1255 | SAMN05216498_0542 | Stage II sporulation protein GA (sporulation sigma-E factor processing peptidase); Probable aspartic protease that is responsible for the proteolytic cleavage of the RNA polymerase sigma E factor (SigE/spoIIGB) to yield the active peptide in the mother cell during sporulation. Responds to a signal from the forespore that is triggered by the extracellular signal protein SpoIIR. | Spore cortex biosynthesis protein YabQ. | 0.709 |
| SDN04483.1 | SDN18460.1 | SAMN05216498_1255 | SAMN05216498_1616 | Stage II sporulation protein GA (sporulation sigma-E factor processing peptidase); Probable aspartic protease that is responsible for the proteolytic cleavage of the RNA polymerase sigma E factor (SigE/spoIIGB) to yield the active peptide in the mother cell during sporulation. Responds to a signal from the forespore that is triggered by the extracellular signal protein SpoIIR. | MFS transporter, YQGE family, putative transporter. | 0.600 |
| SDN04483.1 | SDN18653.1 | SAMN05216498_1255 | SAMN05216498_1626 | Stage II sporulation protein GA (sporulation sigma-E factor processing peptidase); Probable aspartic protease that is responsible for the proteolytic cleavage of the RNA polymerase sigma E factor (SigE/spoIIGB) to yield the active peptide in the mother cell during sporulation. Responds to a signal from the forespore that is triggered by the extracellular signal protein SpoIIR. | Hypothetical protein. | 0.656 |
| SDN04483.1 | SDN22269.1 | SAMN05216498_1255 | SAMN05216498_1755 | Stage II sporulation protein GA (sporulation sigma-E factor processing peptidase); Probable aspartic protease that is responsible for the proteolytic cleavage of the RNA polymerase sigma E factor (SigE/spoIIGB) to yield the active peptide in the mother cell during sporulation. Responds to a signal from the forespore that is triggered by the extracellular signal protein SpoIIR. | Stage VI sporulation protein D. | 0.720 |
| SDN04483.1 | SDN60596.1 | SAMN05216498_1255 | SAMN05216498_2648 | Stage II sporulation protein GA (sporulation sigma-E factor processing peptidase); Probable aspartic protease that is responsible for the proteolytic cleavage of the RNA polymerase sigma E factor (SigE/spoIIGB) to yield the active peptide in the mother cell during sporulation. Responds to a signal from the forespore that is triggered by the extracellular signal protein SpoIIR. | Protein of unknown function. | 0.692 |
| SDN04483.1 | SDN61742.1 | SAMN05216498_1255 | SAMN05216498_2684 | Stage II sporulation protein GA (sporulation sigma-E factor processing peptidase); Probable aspartic protease that is responsible for the proteolytic cleavage of the RNA polymerase sigma E factor (SigE/spoIIGB) to yield the active peptide in the mother cell during sporulation. Responds to a signal from the forespore that is triggered by the extracellular signal protein SpoIIR. | Heptaprenyl diphosphate synthase (HEPPP synthase) subunit 1. | 0.569 |
| SDN06167.1 | SDM77378.1 | SAMN05216498_1315 | SAMN05216498_0542 | Sporulation lipoprotein, YhcN/YlaJ family. | Spore cortex biosynthesis protein YabQ. | 0.548 |
| SDN06167.1 | SDM88477.1 | SAMN05216498_1315 | SAMN05216498_0907 | Sporulation lipoprotein, YhcN/YlaJ family. | LPXTG-motif cell wall anchor domain-containing protein. | 0.529 |
| SDN06167.1 | SDN18460.1 | SAMN05216498_1315 | SAMN05216498_1616 | Sporulation lipoprotein, YhcN/YlaJ family. | MFS transporter, YQGE family, putative transporter. | 0.684 |
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