Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDN01681.1 | SDN01788.1 | SAMN05216498_1159 | SAMN05216498_1163 | Flagellar protein FliO/FliZ. | Flagellar FliL protein; Controls the rotational direction of flagella during chemotaxis; Belongs to the FliL family. | 0.992 |
SDN01681.1 | SDN01921.1 | SAMN05216498_1159 | SAMN05216498_1168 | Flagellar protein FliO/FliZ. | Hook-length control protein FliK. | 0.967 |
SDN01681.1 | SDN62123.1 | SAMN05216498_1159 | SAMN05216498_2695 | Flagellar protein FliO/FliZ. | c-di-GMP-binding flagellar brake protein YcgR, contains PilZNR and PilZ domains. | 0.746 |
SDN01681.1 | SDN81097.1 | SAMN05216498_1159 | SAMN05216498_3130 | Flagellar protein FliO/FliZ. | Chemotaxis protein MotB. | 0.505 |
SDN01681.1 | SDO02812.1 | SAMN05216498_1159 | SAMN05216498_0486 | Flagellar protein FliO/FliZ. | Negative regulator of flagellin synthesis FlgM. | 0.877 |
SDN01681.1 | SDO02844.1 | SAMN05216498_1159 | SAMN05216498_0487 | Flagellar protein FliO/FliZ. | FlgN protein. | 0.948 |
SDN01681.1 | SDO03154.1 | SAMN05216498_1159 | SAMN05216498_0500 | Flagellar protein FliO/FliZ. | Flagellar hook-associated protein 2; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end. | 0.812 |
SDN01681.1 | SDO03190.1 | SAMN05216498_1159 | SAMN05216498_0501 | Flagellar protein FliO/FliZ. | Flagellar protein FliS. | 0.853 |
SDN01681.1 | flgK | SAMN05216498_1159 | SAMN05216498_0488 | Flagellar protein FliO/FliZ. | Flagellar hook-associated protein 1 FlgK. | 0.875 |
SDN01788.1 | SDN01681.1 | SAMN05216498_1163 | SAMN05216498_1159 | Flagellar FliL protein; Controls the rotational direction of flagella during chemotaxis; Belongs to the FliL family. | Flagellar protein FliO/FliZ. | 0.992 |
SDN01788.1 | SDN01921.1 | SAMN05216498_1163 | SAMN05216498_1168 | Flagellar FliL protein; Controls the rotational direction of flagella during chemotaxis; Belongs to the FliL family. | Hook-length control protein FliK. | 0.996 |
SDN01788.1 | SDN62123.1 | SAMN05216498_1163 | SAMN05216498_2695 | Flagellar FliL protein; Controls the rotational direction of flagella during chemotaxis; Belongs to the FliL family. | c-di-GMP-binding flagellar brake protein YcgR, contains PilZNR and PilZ domains. | 0.772 |
SDN01788.1 | SDN81097.1 | SAMN05216498_1163 | SAMN05216498_3130 | Flagellar FliL protein; Controls the rotational direction of flagella during chemotaxis; Belongs to the FliL family. | Chemotaxis protein MotB. | 0.803 |
SDN01788.1 | SDO02812.1 | SAMN05216498_1163 | SAMN05216498_0486 | Flagellar FliL protein; Controls the rotational direction of flagella during chemotaxis; Belongs to the FliL family. | Negative regulator of flagellin synthesis FlgM. | 0.963 |
SDN01788.1 | SDO02844.1 | SAMN05216498_1163 | SAMN05216498_0487 | Flagellar FliL protein; Controls the rotational direction of flagella during chemotaxis; Belongs to the FliL family. | FlgN protein. | 0.941 |
SDN01788.1 | SDO03154.1 | SAMN05216498_1163 | SAMN05216498_0500 | Flagellar FliL protein; Controls the rotational direction of flagella during chemotaxis; Belongs to the FliL family. | Flagellar hook-associated protein 2; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end. | 0.895 |
SDN01788.1 | SDO03190.1 | SAMN05216498_1163 | SAMN05216498_0501 | Flagellar FliL protein; Controls the rotational direction of flagella during chemotaxis; Belongs to the FliL family. | Flagellar protein FliS. | 0.835 |
SDN01788.1 | flgK | SAMN05216498_1163 | SAMN05216498_0488 | Flagellar FliL protein; Controls the rotational direction of flagella during chemotaxis; Belongs to the FliL family. | Flagellar hook-associated protein 1 FlgK. | 0.914 |
SDN01921.1 | SDN01681.1 | SAMN05216498_1168 | SAMN05216498_1159 | Hook-length control protein FliK. | Flagellar protein FliO/FliZ. | 0.967 |
SDN01921.1 | SDN01788.1 | SAMN05216498_1168 | SAMN05216498_1163 | Hook-length control protein FliK. | Flagellar FliL protein; Controls the rotational direction of flagella during chemotaxis; Belongs to the FliL family. | 0.996 |
page 1 of 5