Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDN62347.1 | SDN62381.1 | SAMN05216498_2702 | SAMN05216498_2703 | Adapter protein MecA 1/2; Enables the recognition and targeting of unfolded and aggregated proteins to the ClpC protease or to other proteins involved in proteolysis; Belongs to the MecA family. | Hypothetical protein. | 0.410 |
SDN62347.1 | SDN62416.1 | SAMN05216498_2702 | SAMN05216498_2704 | Adapter protein MecA 1/2; Enables the recognition and targeting of unfolded and aggregated proteins to the ClpC protease or to other proteins involved in proteolysis; Belongs to the MecA family. | Hypothetical protein. | 0.567 |
SDN62347.1 | SDN62442.1 | SAMN05216498_2702 | SAMN05216498_2705 | Adapter protein MecA 1/2; Enables the recognition and targeting of unfolded and aggregated proteins to the ClpC protease or to other proteins involved in proteolysis; Belongs to the MecA family. | ATP-dependent DNA helicase RecQ. | 0.410 |
SDN62347.1 | SDN62482.1 | SAMN05216498_2702 | SAMN05216498_2706 | Adapter protein MecA 1/2; Enables the recognition and targeting of unfolded and aggregated proteins to the ClpC protease or to other proteins involved in proteolysis; Belongs to the MecA family. | Uncharacterized protein YpbB. | 0.421 |
SDN62347.1 | SDN62512.1 | SAMN05216498_2702 | SAMN05216498_2707 | Adapter protein MecA 1/2; Enables the recognition and targeting of unfolded and aggregated proteins to the ClpC protease or to other proteins involved in proteolysis; Belongs to the MecA family. | Ferredoxin. | 0.481 |
SDN62347.1 | ddl-2 | SAMN05216498_2702 | SAMN05216498_2701 | Adapter protein MecA 1/2; Enables the recognition and targeting of unfolded and aggregated proteins to the ClpC protease or to other proteins involved in proteolysis; Belongs to the MecA family. | D-alanine-D-alanine ligase; Cell wall formation; Belongs to the D-alanine--D-alanine ligase family. | 0.788 |
SDN62381.1 | SDN62347.1 | SAMN05216498_2703 | SAMN05216498_2702 | Hypothetical protein. | Adapter protein MecA 1/2; Enables the recognition and targeting of unfolded and aggregated proteins to the ClpC protease or to other proteins involved in proteolysis; Belongs to the MecA family. | 0.410 |
SDN62381.1 | SDN62416.1 | SAMN05216498_2703 | SAMN05216498_2704 | Hypothetical protein. | Hypothetical protein. | 0.773 |
SDN62381.1 | SDN62442.1 | SAMN05216498_2703 | SAMN05216498_2705 | Hypothetical protein. | ATP-dependent DNA helicase RecQ. | 0.773 |
SDN62381.1 | SDN62482.1 | SAMN05216498_2703 | SAMN05216498_2706 | Hypothetical protein. | Uncharacterized protein YpbB. | 0.773 |
SDN62381.1 | SDN62512.1 | SAMN05216498_2703 | SAMN05216498_2707 | Hypothetical protein. | Ferredoxin. | 0.552 |
SDN62381.1 | ddl-2 | SAMN05216498_2703 | SAMN05216498_2701 | Hypothetical protein. | D-alanine-D-alanine ligase; Cell wall formation; Belongs to the D-alanine--D-alanine ligase family. | 0.401 |
SDN62416.1 | SDN62347.1 | SAMN05216498_2704 | SAMN05216498_2702 | Hypothetical protein. | Adapter protein MecA 1/2; Enables the recognition and targeting of unfolded and aggregated proteins to the ClpC protease or to other proteins involved in proteolysis; Belongs to the MecA family. | 0.567 |
SDN62416.1 | SDN62381.1 | SAMN05216498_2704 | SAMN05216498_2703 | Hypothetical protein. | Hypothetical protein. | 0.773 |
SDN62416.1 | SDN62442.1 | SAMN05216498_2704 | SAMN05216498_2705 | Hypothetical protein. | ATP-dependent DNA helicase RecQ. | 0.803 |
SDN62416.1 | SDN62482.1 | SAMN05216498_2704 | SAMN05216498_2706 | Hypothetical protein. | Uncharacterized protein YpbB. | 0.800 |
SDN62416.1 | SDN62512.1 | SAMN05216498_2704 | SAMN05216498_2707 | Hypothetical protein. | Ferredoxin. | 0.605 |
SDN62416.1 | ddl-2 | SAMN05216498_2704 | SAMN05216498_2701 | Hypothetical protein. | D-alanine-D-alanine ligase; Cell wall formation; Belongs to the D-alanine--D-alanine ligase family. | 0.422 |
SDN62442.1 | SDN62347.1 | SAMN05216498_2705 | SAMN05216498_2702 | ATP-dependent DNA helicase RecQ. | Adapter protein MecA 1/2; Enables the recognition and targeting of unfolded and aggregated proteins to the ClpC protease or to other proteins involved in proteolysis; Belongs to the MecA family. | 0.410 |
SDN62442.1 | SDN62381.1 | SAMN05216498_2705 | SAMN05216498_2703 | ATP-dependent DNA helicase RecQ. | Hypothetical protein. | 0.773 |
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