STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDN63237.1Stage V sporulation protein AB. (139 aa)    
Predicted Functional Partners:
SDN63277.1
Stage V sporulation protein AA.
 
  
 0.963
SDN63204.1
Stage V sporulation protein AC.
 
  
 0.903
SDN63184.1
Stage V sporulation protein AD.
 
  
 0.891
SDN63152.1
Stage V sporulation protein AE.
 
  
 0.844
SDN63119.1
Stage V sporulation protein AF.
 
  
 0.800
SDN17285.1
Stage III sporulation protein AG.
  
     0.679
SDN18460.1
MFS transporter, YQGE family, putative transporter.
  
     0.662
SDM77219.1
Stage II sporulation protein E.
  
     0.639
spoIIAB
Stage II sporulation protein AB (anti-sigma F factor); Binds to sigma F and blocks its ability to form an RNA polymerase holoenzyme (E-sigma F). Phosphorylates SpoIIAA on a serine residue. This phosphorylation may enable SpoIIAA to act as an anti- anti-sigma factor that counteracts SpoIIAB and thus releases sigma F from inhibition.
 
   
 0.636
SDN62153.1
Spore germination protein.
  
    0.633
Your Current Organism:
Tenuibacillus multivorans
NCBI taxonomy Id: 237069
Other names: AS 1.3442, CGMCC 1.3442, NBRC 100370, T. multivorans, Tenuibacillus multivorans Ren and Zhou 2005, cf. Filobacillus sp. 1, strain 28-1
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