STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDN69154.1Transcriptional regulator, contains XRE-family HTH domain. (102 aa)    
Predicted Functional Partners:
SDN99794.1
Helix-turn-helix.
 
     0.768
cinA
Nicotinamide-nucleotide amidase; Belongs to the CinA family.
    
 0.688
SDN69111.1
Putative transcriptional regulator.
       0.578
SDN69177.1
Hypothetical protein.
       0.499
SDN69207.1
Hypothetical protein.
       0.484
SDN69232.1
Hypothetical protein.
       0.454
SDN69260.1
Hypothetical protein.
       0.454
SDN69284.1
Protein of unknown function.
  
  
 0.443
Your Current Organism:
Tenuibacillus multivorans
NCBI taxonomy Id: 237069
Other names: AS 1.3442, CGMCC 1.3442, NBRC 100370, T. multivorans, Tenuibacillus multivorans Ren and Zhou 2005, cf. Filobacillus sp. 1, strain 28-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.