Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDM84804.1 | SDN70789.1 | SAMN05216498_0782 | SAMN05216498_2915 | FMN-dependent dehydrogenase, includes L-lactate dehydrogenase and type II isopentenyl diphosphate isomerase. | L-alanine-DL-glutamate epimerase; Belongs to the mandelate racemase/muconate lactonizing enzyme family. | 0.420 |
SDN25786.1 | SDN70789.1 | SAMN05216498_1875 | SAMN05216498_2915 | Choline dehydrogenase. | L-alanine-DL-glutamate epimerase; Belongs to the mandelate racemase/muconate lactonizing enzyme family. | 0.429 |
SDN26292.1 | SDN70789.1 | SAMN05216498_1890 | SAMN05216498_2915 | Catechol 1,2-dioxygenase. | L-alanine-DL-glutamate epimerase; Belongs to the mandelate racemase/muconate lactonizing enzyme family. | 0.532 |
SDN51627.1 | SDN70789.1 | SAMN05216498_2470 | SAMN05216498_2915 | 2-dehydro-3-deoxygluconokinase. | L-alanine-DL-glutamate epimerase; Belongs to the mandelate racemase/muconate lactonizing enzyme family. | 0.411 |
SDN51979.1 | SDN70789.1 | SAMN05216498_2481 | SAMN05216498_2915 | 2-dehydro-3-deoxygluconokinase. | L-alanine-DL-glutamate epimerase; Belongs to the mandelate racemase/muconate lactonizing enzyme family. | 0.411 |
SDN70789.1 | SDM84804.1 | SAMN05216498_2915 | SAMN05216498_0782 | L-alanine-DL-glutamate epimerase; Belongs to the mandelate racemase/muconate lactonizing enzyme family. | FMN-dependent dehydrogenase, includes L-lactate dehydrogenase and type II isopentenyl diphosphate isomerase. | 0.420 |
SDN70789.1 | SDN25786.1 | SAMN05216498_2915 | SAMN05216498_1875 | L-alanine-DL-glutamate epimerase; Belongs to the mandelate racemase/muconate lactonizing enzyme family. | Choline dehydrogenase. | 0.429 |
SDN70789.1 | SDN26292.1 | SAMN05216498_2915 | SAMN05216498_1890 | L-alanine-DL-glutamate epimerase; Belongs to the mandelate racemase/muconate lactonizing enzyme family. | Catechol 1,2-dioxygenase. | 0.532 |
SDN70789.1 | SDN51627.1 | SAMN05216498_2915 | SAMN05216498_2470 | L-alanine-DL-glutamate epimerase; Belongs to the mandelate racemase/muconate lactonizing enzyme family. | 2-dehydro-3-deoxygluconokinase. | 0.411 |
SDN70789.1 | SDN51979.1 | SAMN05216498_2915 | SAMN05216498_2481 | L-alanine-DL-glutamate epimerase; Belongs to the mandelate racemase/muconate lactonizing enzyme family. | 2-dehydro-3-deoxygluconokinase. | 0.411 |