STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDN73961.1Two-component system, NarL family, sensor histidine kinase DesK. (377 aa)    
Predicted Functional Partners:
SDN73924.1
Two-component system, NarL family, response regulator DesR.
 0.997
SDN37708.1
DNA-binding response regulator, NarL/FixJ family, contains REC and HTH domains.
 0.924
SDN86778.1
DNA-binding response regulator, NarL/FixJ family, contains REC and HTH domains.
 0.918
SDO02525.1
Two-component system, NarL family, response regulator DegU.
 0.917
SDN28165.1
Two-component system, NarL family, response regulator LiaR.
 
 0.913
SDN73995.1
Omega-6 fatty acid desaturase (delta-12 desaturase).
 
   
 0.785
SDN38167.1
PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein.
   
 0.750
SDM87468.1
PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein.
   
 0.704
SDN73892.1
Hypothetical protein.
       0.628
SDN28229.1
Lia operon protein LiaF.
  
    0.555
Your Current Organism:
Tenuibacillus multivorans
NCBI taxonomy Id: 237069
Other names: AS 1.3442, CGMCC 1.3442, NBRC 100370, T. multivorans, Tenuibacillus multivorans Ren and Zhou 2005, cf. Filobacillus sp. 1, strain 28-1
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