STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDN79439.1Choline dehydrogenase; Involved in the biosynthesis of the osmoprotectant glycine betaine. Catalyzes the oxidation of choline to betaine aldehyde and betaine aldehyde to glycine betaine at the same rate. (561 aa)    
Predicted Functional Partners:
SDO02775.1
Flagellar operon protein TIGR03826.
    
 0.832
SDN79409.1
Betaine-aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
 
 0.821
SDN18935.1
Cytochrome c550.
   
 
 0.782
SDN70601.1
Cytochrome C oxidase, cbb3-type, subunit III.
   
 
 0.782
SDN24750.1
Pyruvate kinase; Belongs to the pyruvate kinase family.
   
 
 0.665
SDN61476.1
Tfp pilus assembly protein PilF.
    
  0.624
tyrS
tyrosyl-tRNA synthetase; Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two- step reaction: tyrosine is first activated by ATP to form Tyr-AMP and then transferred to the acceptor end of tRNA(Tyr); Belongs to the class-I aminoacyl-tRNA synthetase family. TyrS type 1 subfamily.
 
  
   0.614
SDN96576.1
Lysophospholipase.
 
  
 0.608
SDM87928.1
Tetratrico peptide repeat-containing protein.
    
  0.596
SDN20911.1
Tetratricopeptide repeat-containing protein.
    
  0.596
Your Current Organism:
Tenuibacillus multivorans
NCBI taxonomy Id: 237069
Other names: AS 1.3442, CGMCC 1.3442, NBRC 100370, T. multivorans, Tenuibacillus multivorans Ren and Zhou 2005, cf. Filobacillus sp. 1, strain 28-1
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.