STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDN80863.1Gas vesicle protein. (142 aa)    
Predicted Functional Partners:
SDN80831.1
Uncharacterized protein YoxC, contains an MCP-like domain.
 
    0.950
SDN80891.1
Bacillithiol system protein YtxJ.
  
    0.868
sigA
RNA polymerase primary sigma factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth.
   
    0.587
rsbW
Serine/threonine-protein kinase RsbW; Negative regulator of sigma-B activity. Phosphorylates and inactivates its specific antagonist protein, RsbV. Upon phosphorylation of RsbV, RsbW is released and binds to sigma-B, thereby blocking its ability to form an RNA polymerase holoenzyme (E-sigma-B).
 
    0.576
SDN61443.1
Uncharacterized protein YpiB, UPF0302 family.
  
    0.528
SDN80788.1
Aminopeptidase.
       0.516
SDN20576.1
Protein of unknown function.
  
     0.509
SDN99483.1
Uncharacterized membrane protein YgaE, UPF0421/DUF939 family.
  
     0.482
SDN99737.1
Hypothetical protein.
   
    0.452
SDN70278.1
DUF4097 and DUF4098 domain-containing protein YvlB.
 
    0.449
Your Current Organism:
Tenuibacillus multivorans
NCBI taxonomy Id: 237069
Other names: AS 1.3442, CGMCC 1.3442, NBRC 100370, T. multivorans, Tenuibacillus multivorans Ren and Zhou 2005, cf. Filobacillus sp. 1, strain 28-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.