STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDO23065.1Acetyltransferase (GNAT) domain-containing protein. (168 aa)    
Predicted Functional Partners:
SDO23045.1
Hypothetical protein.
       0.610
SDO23031.1
NTP pyrophosphatase, house-cleaning of non-canonical NTPs.
       0.608
SDO23008.1
Hypothetical protein.
 
     0.521
SDO41952.1
Hypothetical protein.
   
    0.483
SDO12345.1
General stress protein 26.
   
    0.478
SDO18345.1
Hypothetical protein.
  
    0.473
SDO32938.1
EpsG family protein.
  
     0.467
SDO13256.1
NADP-dependent alcohol dehydrogenase.
  
    0.410
Your Current Organism:
Cloacibacterium normanense
NCBI taxonomy Id: 237258
Other names: ATCC BAA-825, C. normanense, CCUG 46293, CIP 108613, Cloacibacterium normanense Allen et al. 2006, Cloacibacterium sp. IMET F, DSM 15886, cf. Bergeyella sp. CCUG 46293, strain NRS1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.