STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDO23135.1Maltogenic Amylase, C-terminal domain. (456 aa)    
Predicted Functional Partners:
SDO23227.1
Hypothetical protein.
       0.594
SDO12873.1
Maltose/moltooligosaccharide transporter.
 
  
 0.591
SDO12856.1
Glycosidase; Belongs to the glycosyl hydrolase 13 family.
    
0.557
SDO13504.1
Basic amino acid/polyamine antiporter, APA family.
   
 0.530
SDO46194.1
Amino acid/polyamine/organocation transporter, APC superfamily.
   
 0.530
SDO92892.1
Amino acid transporter.
   
 0.530
SDO81494.1
Por secretion system C-terminal sorting domain-containing protein; Belongs to the glycosyl hydrolase 13 family.
 
  
0.504
glgP
Starch phosphorylase.
 
 
 0.482
SDO54776.1
Predicted hydrolase of the alpha/beta superfamily.
 
     0.457
glgA
Starch synthase; Synthesizes alpha-1,4-glucan chains using ADP-glucose.
 
  
 0.447
Your Current Organism:
Cloacibacterium normanense
NCBI taxonomy Id: 237258
Other names: ATCC BAA-825, C. normanense, CCUG 46293, CIP 108613, Cloacibacterium normanense Allen et al. 2006, Cloacibacterium sp. IMET F, DSM 15886, cf. Bergeyella sp. CCUG 46293, strain NRS1
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