STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ccoGCytochrome c oxidase accessory protein FixG. (481 aa)    
Predicted Functional Partners:
ccoN
Cytochrome c oxidase cbb3-type subunit I/II; Belongs to the heme-copper respiratory oxidase family.
 
  
 0.979
SDO34663.1
Cytochrome c oxidase cbb3-type subunit 3.
 
  
 0.944
SDO34887.1
Hypothetical protein.
 
     0.944
SDO34856.1
FixH protein.
 
  
 0.937
SDO48843.1
Prokaryotic molybdopterin-containing oxidoreductase family, iron-sulfur binding subunit.
 
  
 0.873
SDO34443.1
Cu+-exporting ATPase.
 
  
 0.860
hemN
Oxygen-independent coproporphyrinogen-3 oxidase; Belongs to the anaerobic coproporphyrinogen-III oxidase family.
 
  
 0.808
SDO34484.1
Hypothetical protein.
  
  
 0.779
SDO62427.1
Nitric oxide reductase, NorB subunit apoprotein.
 
  
 0.712
SDO34909.1
Hypothetical protein.
       0.592
Your Current Organism:
Cloacibacterium normanense
NCBI taxonomy Id: 237258
Other names: ATCC BAA-825, C. normanense, CCUG 46293, CIP 108613, Cloacibacterium normanense Allen et al. 2006, Cloacibacterium sp. IMET F, DSM 15886, cf. Bergeyella sp. CCUG 46293, strain NRS1
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