STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDO49669.1Hypothetical protein. (145 aa)    
Predicted Functional Partners:
SDO73815.1
Integral membrane protein.
 
     0.744
SDO80227.1
Hypothetical protein.
  
     0.712
SDO23532.1
Protein of unknown function.
  
     0.692
SDO80491.1
Protein of unknown function.
  
     0.687
SDO24750.1
Hypothetical protein.
  
     0.674
SDO53660.1
Hypothetical protein.
  
     0.659
SDO47437.1
Hypothetical protein.
  
     0.646
SDO89948.1
Surface antigen.
  
     0.621
SDO46591.1
Putative auto-transporter adhesin, head GIN domain.
  
     0.620
SDO68837.1
Long-chain fatty acid transport protein.
  
     0.620
Your Current Organism:
Cloacibacterium normanense
NCBI taxonomy Id: 237258
Other names: ATCC BAA-825, C. normanense, CCUG 46293, CIP 108613, Cloacibacterium normanense Allen et al. 2006, Cloacibacterium sp. IMET F, DSM 15886, cf. Bergeyella sp. CCUG 46293, strain NRS1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.