STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDO56703.1Por secretion system C-terminal sorting domain-containing protein. (874 aa)    
Predicted Functional Partners:
SDO49604.1
Exosortase F-associated protein.
  
     0.771
xrtF
Exosortase family protein XrtF.
  
     0.768
SDO13293.1
Por secretion system C-terminal sorting domain-containing protein; Belongs to the peptidase S8 family.
 
   0.762
SDO45857.1
Por secretion system C-terminal sorting domain-containing protein.
    0.753
PorQ
Hypothetical protein.
  
     0.740
SDO90953.1
Gliding motility-associated C-terminal domain-containing protein.
  
     0.736
PorU
Peptidase family C25.
 
     0.711
SDO39710.1
Hypothetical protein.
 
     0.691
SDO24767.1
Por secretion system C-terminal sorting domain-containing protein.
 
     0.682
SDO65803.1
Hypothetical protein.
  
     0.677
Your Current Organism:
Cloacibacterium normanense
NCBI taxonomy Id: 237258
Other names: ATCC BAA-825, C. normanense, CCUG 46293, CIP 108613, Cloacibacterium normanense Allen et al. 2006, Cloacibacterium sp. IMET F, DSM 15886, cf. Bergeyella sp. CCUG 46293, strain NRS1
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