Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDO14299.1 | SDO66217.1 | SAMN04489756_101103 | SAMN04489756_11325 | Methyltransferase domain-containing protein. | Phosphinothricin acetyltransferase. | 0.901 |
SDO66195.1 | SDO66217.1 | SAMN04489756_11324 | SAMN04489756_11325 | Hypothetical protein. | Phosphinothricin acetyltransferase. | 0.553 |
SDO66217.1 | SDO14299.1 | SAMN04489756_11325 | SAMN04489756_101103 | Phosphinothricin acetyltransferase. | Methyltransferase domain-containing protein. | 0.901 |
SDO66217.1 | SDO66195.1 | SAMN04489756_11325 | SAMN04489756_11324 | Phosphinothricin acetyltransferase. | Hypothetical protein. | 0.553 |
SDO66217.1 | mgsA-2 | SAMN04489756_11325 | SAMN04489756_11326 | Phosphinothricin acetyltransferase. | Methylglyoxal synthase; Catalyzes the formation of methylglyoxal from dihydroxyacetone phosphate. | 0.477 |
mgsA-2 | SDO66217.1 | SAMN04489756_11326 | SAMN04489756_11325 | Methylglyoxal synthase; Catalyzes the formation of methylglyoxal from dihydroxyacetone phosphate. | Phosphinothricin acetyltransferase. | 0.477 |