Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
LpdA | SDO69808.1 | SAMN04489756_101163 | SAMN04489756_11449 | Dihydrolipoamide dehydrogenase. | Thioredoxin-like. | 0.594 |
LpdA | lpdA | SAMN04489756_101163 | SAMN04489756_107111 | Dihydrolipoamide dehydrogenase. | Dihydrolipoamide dehydrogenase. | 0.908 |
LpdA | msrA-2 | SAMN04489756_101163 | SAMN04489756_1335 | Dihydrolipoamide dehydrogenase. | Peptide methionine sulfoxide reductase msrA/msrB; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine. | 0.548 |
PorU | SDO69808.1 | SAMN04489756_11410 | SAMN04489756_11449 | Peptidase family C25. | Thioredoxin-like. | 0.533 |
SDO15127.1 | SDO66152.1 | SAMN04489756_101149 | SAMN04489756_11322 | Peptidyl-prolyl cis-trans isomerase (rotamase)-cyclophilin family. | Peroxiredoxin (alkyl hydroperoxide reductase subunit C). | 0.438 |
SDO15127.1 | SDO69808.1 | SAMN04489756_101149 | SAMN04489756_11449 | Peptidyl-prolyl cis-trans isomerase (rotamase)-cyclophilin family. | Thioredoxin-like. | 0.596 |
SDO15127.1 | msrA-2 | SAMN04489756_101149 | SAMN04489756_1335 | Peptidyl-prolyl cis-trans isomerase (rotamase)-cyclophilin family. | Peptide methionine sulfoxide reductase msrA/msrB; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine. | 0.506 |
SDO26755.1 | SDO69808.1 | SAMN04489756_10417 | SAMN04489756_11449 | Thiosulfate/3-mercaptopyruvate sulfurtransferase. | Thioredoxin-like. | 0.529 |
SDO26755.1 | msrA-2 | SAMN04489756_10417 | SAMN04489756_1335 | Thiosulfate/3-mercaptopyruvate sulfurtransferase. | Peptide methionine sulfoxide reductase msrA/msrB; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine. | 0.444 |
SDO39988.1 | SDO69808.1 | SAMN04489756_10617 | SAMN04489756_11449 | Thioredoxin-like domain-containing protein. | Thioredoxin-like. | 0.536 |
SDO39988.1 | msrA | SAMN04489756_10617 | SAMN04489756_1229 | Thioredoxin-like domain-containing protein. | Peptide-methionine (S)-S-oxide reductase; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine. | 0.450 |
SDO39988.1 | msrA-2 | SAMN04489756_10617 | SAMN04489756_1335 | Thioredoxin-like domain-containing protein. | Peptide methionine sulfoxide reductase msrA/msrB; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine. | 0.968 |
SDO66152.1 | SDO15127.1 | SAMN04489756_11322 | SAMN04489756_101149 | Peroxiredoxin (alkyl hydroperoxide reductase subunit C). | Peptidyl-prolyl cis-trans isomerase (rotamase)-cyclophilin family. | 0.438 |
SDO66152.1 | SDO69808.1 | SAMN04489756_11322 | SAMN04489756_11449 | Peroxiredoxin (alkyl hydroperoxide reductase subunit C). | Thioredoxin-like. | 0.749 |
SDO66152.1 | msrA-2 | SAMN04489756_11322 | SAMN04489756_1335 | Peroxiredoxin (alkyl hydroperoxide reductase subunit C). | Peptide methionine sulfoxide reductase msrA/msrB; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine. | 0.455 |
SDO69792.1 | SDO69808.1 | SAMN04489756_11448 | SAMN04489756_11449 | Alpha-amylase. | Thioredoxin-like. | 0.701 |
SDO69808.1 | LpdA | SAMN04489756_11449 | SAMN04489756_101163 | Thioredoxin-like. | Dihydrolipoamide dehydrogenase. | 0.594 |
SDO69808.1 | PorU | SAMN04489756_11449 | SAMN04489756_11410 | Thioredoxin-like. | Peptidase family C25. | 0.533 |
SDO69808.1 | SDO15127.1 | SAMN04489756_11449 | SAMN04489756_101149 | Thioredoxin-like. | Peptidyl-prolyl cis-trans isomerase (rotamase)-cyclophilin family. | 0.596 |
SDO69808.1 | SDO26755.1 | SAMN04489756_11449 | SAMN04489756_10417 | Thioredoxin-like. | Thiosulfate/3-mercaptopyruvate sulfurtransferase. | 0.529 |
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