STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDO73934.1O-acetylhomoserine sulfhydrylase. (431 aa)    
Predicted Functional Partners:
metX
Homoserine O-acetyltransferase; Transfers an acetyl group from acetyl-CoA to L-homoserine, forming acetyl-L-homoserine.
 
 0.987
SDO24146.1
Cystathionine gamma-synthase.
 
 
 0.976
SDO24162.1
Cystathionine beta-lyase.
 
 
0.939
SDO78828.1
Cystathionine gamma-lyase.
 
 
0.928
cysK
Cysteine synthase; Belongs to the cysteine synthase/cystathionine beta- synthase family.
 
 
 0.915
SDO46631.1
Aspartate aminotransferase.
   
  0.911
SDO50169.1
Serine O-acetyltransferase.
    
 0.911
SDO56937.1
Serine O-acetyltransferase.
    
 0.911
SDO66131.1
Aspartate aminotransferase.
   
  0.911
SDO86731.1
Aspartate aminotransferase.
   
  0.911
Your Current Organism:
Cloacibacterium normanense
NCBI taxonomy Id: 237258
Other names: ATCC BAA-825, C. normanense, CCUG 46293, CIP 108613, Cloacibacterium normanense Allen et al. 2006, Cloacibacterium sp. IMET F, DSM 15886, cf. Bergeyella sp. CCUG 46293, strain NRS1
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