STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDO73624.1Hypothetical protein. (237 aa)    
Predicted Functional Partners:
SDO89158.1
Hypothetical protein.
 
   0.843
SDO80227.1
Hypothetical protein.
  
     0.773
SDO80491.1
Protein of unknown function.
  
     0.773
SDO53446.1
Hypothetical protein.
  
     0.770
SDO46591.1
Putative auto-transporter adhesin, head GIN domain.
  
     0.767
SDO50747.1
Putative porin.
  
     0.764
SDO47437.1
Hypothetical protein.
  
     0.761
SDO24750.1
Hypothetical protein.
  
     0.757
SDO54842.1
Hypothetical protein.
  
     0.754
SDO45989.1
Helix-hairpin-helix motif-containing protein.
  
     0.748
Your Current Organism:
Cloacibacterium normanense
NCBI taxonomy Id: 237258
Other names: ATCC BAA-825, C. normanense, CCUG 46293, CIP 108613, Cloacibacterium normanense Allen et al. 2006, Cloacibacterium sp. IMET F, DSM 15886, cf. Bergeyella sp. CCUG 46293, strain NRS1
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.