STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDO85154.1Putative bacilliredoxin, YphP/YqiW family; Belongs to the UPF0403 family. (136 aa)    
Predicted Functional Partners:
bshC
Bacillithiol biosynthesis cysteine-adding enzyme BshC; Belongs to the BshC family.
  
   
 0.791
bshA
N-acetyl-alpha-D-glucosaminyl L-malate synthase BshA.
  
     0.769
YtxJ
Bacillithiol system protein YtxJ.
  
  
 0.701
bshB1
Bacillithiol biosynthesis deacetylase BshB1.
  
  
 0.677
SDO62784.1
Thioredoxin.
 
    0.654
SDO78862.1
DinB superfamily protein.
  
     0.631
SDO20105.1
Protein of unknown function.
  
     0.562
SDO85175.1
GH3 auxin-responsive promoter.
       0.523
SDO85203.1
Hypothetical protein.
       0.513
SDO83751.1
ABC-2 type transport system permease protein.
  
     0.480
Your Current Organism:
Cloacibacterium normanense
NCBI taxonomy Id: 237258
Other names: ATCC BAA-825, C. normanense, CCUG 46293, CIP 108613, Cloacibacterium normanense Allen et al. 2006, Cloacibacterium sp. IMET F, DSM 15886, cf. Bergeyella sp. CCUG 46293, strain NRS1
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