STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CaO19.2980mRNA splicing protein. (725 aa)    
Predicted Functional Partners:
CaO19.1687
DEAH-box ATP-dependent RNA helicase.
   
 0.998
CLF1
Pre-mRNA-splicing factor CLF1; Involved in pre-mRNA splicing and cell cycle progression. Required for the spliceosome assembly and initiation of the DNA replication (By similarity).
   
  0.995
BUD31
U2 snRNP complex subunit.
   
 0.993
PRP8
U4/U6-U5 snRNP complex subunit.
   
 0.973
SNU114
U5 snRNP GTPase.
   
 
 0.970
CaO19.6347
WD_REPEATS_REGION domain-containing protein.
   
 0.959
CaO19.2893
mRNA splicing protein.
   
 0.945
CaO19.2621
mRNA splicing protein.
    
  0.915
CaO19.7139
Uncharacterized protein.
    
  0.911
LEA1
U2 small nuclear ribonucleoprotein A; Involved in pre-mRNA splicing.
   
 
 0.909
Your Current Organism:
Candida albicans
NCBI taxonomy Id: 237561
Other names: C. albicans SC5314, Candida albicans SC5314
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.