Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| CFT1 | CaO19.325 | Q5AFT3 | A0A1D8PJN1 | Protein CFT1; RNA-binding component of the cleavage and polyadenylation factor (CPF) complex, which plays a key role in polyadenylation- dependent pre-mRNA 3'-end formation and cooperates with cleavage factors including the CFIA complex and NAB4/CFIB. Involved in poly(A) site recognition. May be involved in coupling transcription termination and mRNA 3'-end formation (By similarity); Belongs to the CFT1 family. | Cleavage and polyadenylation specificity factor subunit 2. | 0.999 |
| CFT1 | CaO19.4628 | Q5AFT3 | A0A1D8PLB3 | Protein CFT1; RNA-binding component of the cleavage and polyadenylation factor (CPF) complex, which plays a key role in polyadenylation- dependent pre-mRNA 3'-end formation and cooperates with cleavage factors including the CFIA complex and NAB4/CFIB. Involved in poly(A) site recognition. May be involved in coupling transcription termination and mRNA 3'-end formation (By similarity); Belongs to the CFT1 family. | Cleavage polyadenylation factor subunit. | 0.998 |
| CFT1 | CaO19.7041 | Q5AFT3 | A0A1D8PQP8 | Protein CFT1; RNA-binding component of the cleavage and polyadenylation factor (CPF) complex, which plays a key role in polyadenylation- dependent pre-mRNA 3'-end formation and cooperates with cleavage factors including the CFIA complex and NAB4/CFIB. Involved in poly(A) site recognition. May be involved in coupling transcription termination and mRNA 3'-end formation (By similarity); Belongs to the CFT1 family. | RNA-processing protein. | 0.999 |
| CFT1 | FIP1 | Q5AFT3 | Q5AGC1 | Protein CFT1; RNA-binding component of the cleavage and polyadenylation factor (CPF) complex, which plays a key role in polyadenylation- dependent pre-mRNA 3'-end formation and cooperates with cleavage factors including the CFIA complex and NAB4/CFIB. Involved in poly(A) site recognition. May be involved in coupling transcription termination and mRNA 3'-end formation (By similarity); Belongs to the CFT1 family. | Pre-mRNA polyadenylation factor FIP1; Pre-mRNA polyadenylation factor that directly interacts with poly(A) polymerase; Belongs to the FIP1 family. | 0.999 |
| CFT1 | GLC7 | Q5AFT3 | Q59N42 | Protein CFT1; RNA-binding component of the cleavage and polyadenylation factor (CPF) complex, which plays a key role in polyadenylation- dependent pre-mRNA 3'-end formation and cooperates with cleavage factors including the CFIA complex and NAB4/CFIB. Involved in poly(A) site recognition. May be involved in coupling transcription termination and mRNA 3'-end formation (By similarity); Belongs to the CFT1 family. | Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family. | 0.995 |
| CFT1 | PFS2 | Q5AFT3 | Q59WJ4 | Protein CFT1; RNA-binding component of the cleavage and polyadenylation factor (CPF) complex, which plays a key role in polyadenylation- dependent pre-mRNA 3'-end formation and cooperates with cleavage factors including the CFIA complex and NAB4/CFIB. Involved in poly(A) site recognition. May be involved in coupling transcription termination and mRNA 3'-end formation (By similarity); Belongs to the CFT1 family. | Polyadenylation factor subunit 2; Required for 3'-end cleavage and polyadenylation of pre- mRNAs. Also involved in chromosome segregation where it has a role in chromosome attachment to the mitotic spindle (By similarity). | 0.999 |
| CFT1 | SSU72 | Q5AFT3 | Q59UG2 | Protein CFT1; RNA-binding component of the cleavage and polyadenylation factor (CPF) complex, which plays a key role in polyadenylation- dependent pre-mRNA 3'-end formation and cooperates with cleavage factors including the CFIA complex and NAB4/CFIB. Involved in poly(A) site recognition. May be involved in coupling transcription termination and mRNA 3'-end formation (By similarity); Belongs to the CFT1 family. | RNA polymerase II subunit A C-terminal domain phosphatase. | 0.994 |
| CFT1 | SWD2 | Q5AFT3 | Q59PV3 | Protein CFT1; RNA-binding component of the cleavage and polyadenylation factor (CPF) complex, which plays a key role in polyadenylation- dependent pre-mRNA 3'-end formation and cooperates with cleavage factors including the CFIA complex and NAB4/CFIB. Involved in poly(A) site recognition. May be involved in coupling transcription termination and mRNA 3'-end formation (By similarity); Belongs to the CFT1 family. | WD-repeat containing protein. | 0.996 |
| CFT1 | YSH1 | Q5AFT3 | Q59P50 | Protein CFT1; RNA-binding component of the cleavage and polyadenylation factor (CPF) complex, which plays a key role in polyadenylation- dependent pre-mRNA 3'-end formation and cooperates with cleavage factors including the CFIA complex and NAB4/CFIB. Involved in poly(A) site recognition. May be involved in coupling transcription termination and mRNA 3'-end formation (By similarity); Belongs to the CFT1 family. | Endoribonuclease YSH1; Component of the cleavage factor I (CF I) involved in pre- mRNA 3'-end processing; Belongs to the metallo-beta-lactamase superfamily. RNA- metabolizing metallo-beta-lactamase-like family. CPSF2/YSH1 subfamily. | 0.999 |
| CFT1 | YTH1 | Q5AFT3 | Q59T36 | Protein CFT1; RNA-binding component of the cleavage and polyadenylation factor (CPF) complex, which plays a key role in polyadenylation- dependent pre-mRNA 3'-end formation and cooperates with cleavage factors including the CFIA complex and NAB4/CFIB. Involved in poly(A) site recognition. May be involved in coupling transcription termination and mRNA 3'-end formation (By similarity); Belongs to the CFT1 family. | mRNA 3'-end-processing protein YTH1; Component of the cleavage factor I (CF I) involved in pre- mRNA 3'-end processing; Belongs to the CPSF4/YTH1 family. | 0.999 |
| CaO19.325 | CFT1 | A0A1D8PJN1 | Q5AFT3 | Cleavage and polyadenylation specificity factor subunit 2. | Protein CFT1; RNA-binding component of the cleavage and polyadenylation factor (CPF) complex, which plays a key role in polyadenylation- dependent pre-mRNA 3'-end formation and cooperates with cleavage factors including the CFIA complex and NAB4/CFIB. Involved in poly(A) site recognition. May be involved in coupling transcription termination and mRNA 3'-end formation (By similarity); Belongs to the CFT1 family. | 0.999 |
| CaO19.325 | CaO19.4628 | A0A1D8PJN1 | A0A1D8PLB3 | Cleavage and polyadenylation specificity factor subunit 2. | Cleavage polyadenylation factor subunit. | 0.998 |
| CaO19.325 | CaO19.7041 | A0A1D8PJN1 | A0A1D8PQP8 | Cleavage and polyadenylation specificity factor subunit 2. | RNA-processing protein. | 0.999 |
| CaO19.325 | FIP1 | A0A1D8PJN1 | Q5AGC1 | Cleavage and polyadenylation specificity factor subunit 2. | Pre-mRNA polyadenylation factor FIP1; Pre-mRNA polyadenylation factor that directly interacts with poly(A) polymerase; Belongs to the FIP1 family. | 0.999 |
| CaO19.325 | GLC7 | A0A1D8PJN1 | Q59N42 | Cleavage and polyadenylation specificity factor subunit 2. | Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family. | 0.989 |
| CaO19.325 | PFS2 | A0A1D8PJN1 | Q59WJ4 | Cleavage and polyadenylation specificity factor subunit 2. | Polyadenylation factor subunit 2; Required for 3'-end cleavage and polyadenylation of pre- mRNAs. Also involved in chromosome segregation where it has a role in chromosome attachment to the mitotic spindle (By similarity). | 0.999 |
| CaO19.325 | SSU72 | A0A1D8PJN1 | Q59UG2 | Cleavage and polyadenylation specificity factor subunit 2. | RNA polymerase II subunit A C-terminal domain phosphatase. | 0.995 |
| CaO19.325 | SWD2 | A0A1D8PJN1 | Q59PV3 | Cleavage and polyadenylation specificity factor subunit 2. | WD-repeat containing protein. | 0.995 |
| CaO19.325 | YSH1 | A0A1D8PJN1 | Q59P50 | Cleavage and polyadenylation specificity factor subunit 2. | Endoribonuclease YSH1; Component of the cleavage factor I (CF I) involved in pre- mRNA 3'-end processing; Belongs to the metallo-beta-lactamase superfamily. RNA- metabolizing metallo-beta-lactamase-like family. CPSF2/YSH1 subfamily. | 0.999 |
| CaO19.325 | YTH1 | A0A1D8PJN1 | Q59T36 | Cleavage and polyadenylation specificity factor subunit 2. | mRNA 3'-end-processing protein YTH1; Component of the cleavage factor I (CF I) involved in pre- mRNA 3'-end processing; Belongs to the CPSF4/YTH1 family. | 0.999 |
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