CaO19.7060 protein (Candida albicans) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

CaO19.7060

Uncharacterized protein. (324 aa)

Predicted Functional Partners:

CaO19.2049

0.899

PPS1

0.883

CaO19.5491

0.878

CaO19.3091

0.734

CaO19.3296

0.723

CaO19.4101

0.692

NSP1

0.679

CaO19.4537

0.582

CaO19.6742

0.540

SPT6

0.530

Your Current Organism:

Candida albicans

NCBI taxonomy Id: 237561
Other names: C. albicans SC5314, Candida albicans SC5314

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CaO19.2049	CaO19.7060	Q5AD18	A0A1D8PQM0	Uncharacterized protein.	Uncharacterized protein.	0.899
CaO19.2049	PPS1	Q5AD18	A0A1D8PMG3	Uncharacterized protein.	Pps1p.	0.885
CaO19.3091	CaO19.3296	A0A1D8PMS0	Q5A938	Uncharacterized protein.	Uncharacterized protein.	0.884
CaO19.3091	CaO19.4101	A0A1D8PMS0	Q59X30	Uncharacterized protein.	Uncharacterized protein.	0.880
CaO19.3091	CaO19.5491	A0A1D8PMS0	A0A1D8PHN4	Uncharacterized protein.	Uncharacterized protein.	0.880
CaO19.3091	CaO19.7060	A0A1D8PMS0	A0A1D8PQM0	Uncharacterized protein.	Uncharacterized protein.	0.734
CaO19.3296	CaO19.3091	Q5A938	A0A1D8PMS0	Uncharacterized protein.	Uncharacterized protein.	0.884
CaO19.3296	CaO19.4101	Q5A938	Q59X30	Uncharacterized protein.	Uncharacterized protein.	0.883
CaO19.3296	CaO19.5491	Q5A938	A0A1D8PHN4	Uncharacterized protein.	Uncharacterized protein.	0.882
CaO19.3296	CaO19.7060	Q5A938	A0A1D8PQM0	Uncharacterized protein.	Uncharacterized protein.	0.723
CaO19.4101	CaO19.3091	Q59X30	A0A1D8PMS0	Uncharacterized protein.	Uncharacterized protein.	0.880
CaO19.4101	CaO19.3296	Q59X30	Q5A938	Uncharacterized protein.	Uncharacterized protein.	0.883
CaO19.4101	CaO19.5491	Q59X30	A0A1D8PHN4	Uncharacterized protein.	Uncharacterized protein.	0.880
CaO19.4101	CaO19.7060	Q59X30	A0A1D8PQM0	Uncharacterized protein.	Uncharacterized protein.	0.692
CaO19.4537	CaO19.6742	Q59T94	Q5ADU9	Uncharacterized protein.	RNA polymerase II subunit A C-terminal domain phosphatase; This promotes the activity of RNA polymerase II.	0.982
CaO19.4537	CaO19.7060	Q59T94	A0A1D8PQM0	Uncharacterized protein.	Uncharacterized protein.	0.582
CaO19.4537	SPT6	Q59T94	Q3MNT0	Uncharacterized protein.	Transcription elongation factor SPT6; Plays a role in maintenance of chromatin structure during RNA polymerase II transcription elongation thereby repressing transcription initiation from cryptic promoters. Mediates the reassembly of nucleosomes onto the promoters of at least a selected set of genes during repression; the nucleosome reassembly is essential for transcriptional repression (By similarity); Belongs to the SPT6 family.	0.992
CaO19.5491	CaO19.3091	A0A1D8PHN4	A0A1D8PMS0	Uncharacterized protein.	Uncharacterized protein.	0.880
CaO19.5491	CaO19.3296	A0A1D8PHN4	Q5A938	Uncharacterized protein.	Uncharacterized protein.	0.882
CaO19.5491	CaO19.4101	A0A1D8PHN4	Q59X30	Uncharacterized protein.	Uncharacterized protein.	0.880