Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
A0A1D8PH20 | A0A1D8PNM3 | A0A1D8PH20 | A0A1D8PNM3 | Small nuclear ribonucleoprotein G. | mRNA splicing protein. | 0.999 |
A0A1D8PH20 | A0A1D8PPC8 | A0A1D8PH20 | A0A1D8PPC8 | Small nuclear ribonucleoprotein G. | Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family. | 0.999 |
A0A1D8PH20 | CaO19.2621 | A0A1D8PH20 | A0A1D8PTI0 | Small nuclear ribonucleoprotein G. | mRNA splicing protein. | 0.999 |
A0A1D8PH20 | CaO19.6356 | A0A1D8PH20 | A0A1D8PFI2 | Small nuclear ribonucleoprotein G. | U4/U6-U5 snRNP complex subunit. | 0.998 |
A0A1D8PH20 | CaO19.763 | A0A1D8PH20 | Q59VH0 | Small nuclear ribonucleoprotein G. | Nuclear cap-binding protein subunit 2. | 0.997 |
A0A1D8PH20 | CaO19.7673 | A0A1D8PH20 | A0A1D8PUC1 | Small nuclear ribonucleoprotein G. | Small nuclear ribonucleoprotein Sm D1; Involved in pre-mRNA splicing. Binds snRNA U1, U2, U4 and U5 which contain a highly conserved structural motif called the Sm binding site; Belongs to the snRNP core protein family. | 0.999 |
A0A1D8PH20 | IRC6 | A0A1D8PH20 | Q59P96 | Small nuclear ribonucleoprotein G. | Increased recombination centers protein 6; Involved in gross chromosomal rearrangements (GCRs) and telomere healing. | 0.985 |
A0A1D8PH20 | LEA1 | A0A1D8PH20 | Q5A449 | Small nuclear ribonucleoprotein G. | U2 small nuclear ribonucleoprotein A; Involved in pre-mRNA splicing. | 0.998 |
A0A1D8PH20 | SMD2 | A0A1D8PH20 | A0A1D8PHP3 | Small nuclear ribonucleoprotein G. | Small nuclear ribonucleoprotein Sm D2. | 0.999 |
A0A1D8PH20 | YHC1 | A0A1D8PH20 | Q59P44 | Small nuclear ribonucleoprotein G. | U1 small nuclear ribonucleoprotein C; Component of the spliceosomal U1 snRNP, which is essential for recognition of the pre-mRNA 5' splice-site and the subsequent assembly of the spliceosome. U1-C is directly involved in initial 5' splice-site recognition for both constitutive and regulated alternative splicing. The interaction with the 5' splice-site seems to precede base-pairing between the pre-mRNA and the U1 snRNA. Stimulates commitment or early (E) complex formation by stabilizing the base pairing of the 5' end of the U1 snRNA and the 5' splice-site region. | 0.999 |
A0A1D8PNM3 | A0A1D8PH20 | A0A1D8PNM3 | A0A1D8PH20 | mRNA splicing protein. | Small nuclear ribonucleoprotein G. | 0.999 |
A0A1D8PNM3 | A0A1D8PPC8 | A0A1D8PNM3 | A0A1D8PPC8 | mRNA splicing protein. | Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family. | 0.999 |
A0A1D8PNM3 | CaO19.2621 | A0A1D8PNM3 | A0A1D8PTI0 | mRNA splicing protein. | mRNA splicing protein. | 0.999 |
A0A1D8PNM3 | CaO19.6356 | A0A1D8PNM3 | A0A1D8PFI2 | mRNA splicing protein. | U4/U6-U5 snRNP complex subunit. | 0.995 |
A0A1D8PNM3 | CaO19.763 | A0A1D8PNM3 | Q59VH0 | mRNA splicing protein. | Nuclear cap-binding protein subunit 2. | 0.996 |
A0A1D8PNM3 | CaO19.7673 | A0A1D8PNM3 | A0A1D8PUC1 | mRNA splicing protein. | Small nuclear ribonucleoprotein Sm D1; Involved in pre-mRNA splicing. Binds snRNA U1, U2, U4 and U5 which contain a highly conserved structural motif called the Sm binding site; Belongs to the snRNP core protein family. | 0.999 |
A0A1D8PNM3 | IRC6 | A0A1D8PNM3 | Q59P96 | mRNA splicing protein. | Increased recombination centers protein 6; Involved in gross chromosomal rearrangements (GCRs) and telomere healing. | 0.979 |
A0A1D8PNM3 | LEA1 | A0A1D8PNM3 | Q5A449 | mRNA splicing protein. | U2 small nuclear ribonucleoprotein A; Involved in pre-mRNA splicing. | 0.997 |
A0A1D8PNM3 | SMD2 | A0A1D8PNM3 | A0A1D8PHP3 | mRNA splicing protein. | Small nuclear ribonucleoprotein Sm D2. | 0.999 |
A0A1D8PNM3 | YHC1 | A0A1D8PNM3 | Q59P44 | mRNA splicing protein. | U1 small nuclear ribonucleoprotein C; Component of the spliceosomal U1 snRNP, which is essential for recognition of the pre-mRNA 5' splice-site and the subsequent assembly of the spliceosome. U1-C is directly involved in initial 5' splice-site recognition for both constitutive and regulated alternative splicing. The interaction with the 5' splice-site seems to precede base-pairing between the pre-mRNA and the U1 snRNA. Stimulates commitment or early (E) complex formation by stabilizing the base pairing of the 5' end of the U1 snRNA and the 5' splice-site region. | 0.996 |
page 1 of 6