STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CaO19.2230U2 snRNP complex subunit. (119 aa)    
Predicted Functional Partners:
CaO19.2261
U2 snRNP complex subunit.
   
 0.999
CaO19.6989
RRM domain-containing protein.
   
 0.999
CaO19.7581
U2 snRNP complex subunit.
    
 0.999
LEA1
U2 small nuclear ribonucleoprotein A; Involved in pre-mRNA splicing.
   
 0.999
RSE1
Pre-mRNA-splicing factor RSE1; Involved in pre-mRNA splicing and cell cycle control.
   
 0.999
CaO19.2675
mRNA-binding U2 snRNP complex subunit.
   
 0.999
CaO19.4724
U1-type domain-containing protein.
    
 0.998
A0A1D8PH20
Small nuclear ribonucleoprotein G.
   
 0.997
CaO19.1045
U2 snRNP complex subunit.
   
 0.997
PRP5
Pre-mRNA-processing ATP-dependent RNA helicase PRP5; ATP-dependent RNA helicase involved spliceosome assembly and in nuclear splicing. Catalyzes an ATP-dependent conformational change of U2 snRNP. Bridges U1 and U2 snRNPs and enables stable U2 snRNP association with intron RNA (By similarity); Belongs to the DEAD box helicase family. DDX46/PRP5 subfamily.
    
 0.997
Your Current Organism:
Candida albicans
NCBI taxonomy Id: 237561
Other names: C. albicans SC5314, Candida albicans SC5314
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.