STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CaO19.444RRM domain-containing protein. (145 aa)    
Predicted Functional Partners:
CaO19.4326
U4/U6-U5 snRNP complex subunit.
   
 0.845
SEC9
Protein transport protein SEC9; Late secretory t-SNARE protein required for secretion and proper cytokinesis. Plays an important role in the secretion of virulence-associated extracellular enzymes and vesicle-mediated polarized hyphal growth.
    
 0.809
A0A1D8PNM3
mRNA splicing protein.
    
 0.673
CaO19.82
U4/U6-U5 snRNP complex subunit.
   
 0.615
SMD2
Small nuclear ribonucleoprotein Sm D2.
   
  0.557
A0A1D8PPC8
Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.
    
  0.552
CaO19.7673
Small nuclear ribonucleoprotein Sm D1; Involved in pre-mRNA splicing. Binds snRNA U1, U2, U4 and U5 which contain a highly conserved structural motif called the Sm binding site; Belongs to the snRNP core protein family.
   
  0.551
NOT4
CCR4-NOT core ubiquitin-protein ligase subunit.
      
 0.538
CaO19.1394
Uncharacterized protein.
    
 0.527
A0A1D8PH20
Small nuclear ribonucleoprotein G.
    
  0.525
Your Current Organism:
Candida albicans
NCBI taxonomy Id: 237561
Other names: C. albicans SC5314, Candida albicans SC5314
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.