STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RPT4Proteasome regulatory particle base subunit; Belongs to the AAA ATPase family. (428 aa)    
Predicted Functional Partners:
UBP6
Ubiquitin carboxyl-terminal hydrolase.
   
 0.999
RPN3
Proteasome regulatory particle lid subunit.
   
 0.999
RPN1
26S proteasome regulatory subunit RPN1; Acts as a regulatory subunit of the 26 proteasome which is involved in the ATP-dependent degradation of ubiquitinated proteins.
   
 0.999
CaO19.7264
Proteasome regulatory particle lid subunit.
  
 0.999
CaO19.1993
Proteasome regulatory particle lid subunit.
   
 0.999
RPT6
Proteasome regulatory particle base subunit; Belongs to the AAA ATPase family.
  
0.999
RPT2
Proteasome regulatory particle base subunit; Belongs to the AAA ATPase family.
  
0.999
RPN6
Proteasome regulatory particle lid subunit.
 
 
 0.999
RPT5
Proteasome regulatory particle base subunit; Belongs to the AAA ATPase family.
  
0.999
RPN8
Proteasome regulatory particle lid subunit.
  
 0.999
Your Current Organism:
Candida albicans
NCBI taxonomy Id: 237561
Other names: C. albicans SC5314, Candida albicans SC5314
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