STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AIL59990.1Rieske (2Fe-2S) domain-containing protein. (105 aa)    
Predicted Functional Partners:
AIL64321.1
Rubredoxin.
  
 
 0.779
cobA-2
Siroheme synthase; Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD-dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme. Belongs to the precorrin methyltransferase family. In the N-terminal section; belongs to the precorrin-2 dehydrogenase / sirohydrochlorin ferrochelatase family.
  
  
 0.772
AIL60543.1
Nitrite reductase, large subunit, nucleotide-and Fe/S-cluster binding protein; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family.
  
 
 0.639
AIL64320.1
FAD-dependent pyridine nucleotide-disulfide oxidoreductase; Belongs to the FAD-dependent oxidoreductase family.
  
 
 0.639
AIL59991.1
TfoX domain-containing protein.
 
     0.527
AIL61370.1
Nitrate reductase A subunit beta NarH.
  
  
 0.512
AIL59824.1
Multi-component phenol hydoxylase subunit beta LapL.
   
   0.503
AIL64106.1
Glutamate synthase subunit alpha.
  
  
 0.456
AIL59992.1
Pentapeptide repeat domain-containing protein.
 
    0.437
AIL61369.1
Nitrate reductase A subunit alpha NarG.
  
  
 0.437
Your Current Organism:
Pseudomonas alkylphenolica
NCBI taxonomy Id: 237609
Other names: JCM 16553, KCTC 22206, P. alkylphenolica, Pseudomonas alkylphenolia, Pseudomonas alkylphenolica Mulet et al. 2015, Pseudomonas sp. KL28, strain KL28
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