STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AIL61092.1TonB-dependent siderophore receptor. (823 aa)    
Predicted Functional Partners:
AIL59928.1
FecR family anti-sigma factor protein.
 
 
 0.814
AIL62118.1
Heme uptake transmembrane sensor.
 
 
 0.785
AIL61229.1
Anti-sigma factor FoxR.
 
 
 0.773
AIL62646.1
anti-FecI sigma factor FecR.
 
 
 0.761
AIL61279.1
anti-FecI sigma factor FecR.
 
 
 0.759
AIL59622.1
FecR/PupR family sigma factor regulatory protein.
 
 
 0.749
AIL60075.1
PepSY-associated TM helix domain-containing protein.
 
  
 0.748
AIL63731.1
anti-FecI sigma factor FecR.
 
 
 0.745
AIL60071.1
Sigma factor regulatory protein FecR.
 
 
 0.736
AIL62654.1
FecR family transmembrane sensor protein.
 
 
 0.736
Your Current Organism:
Pseudomonas alkylphenolica
NCBI taxonomy Id: 237609
Other names: JCM 16553, KCTC 22206, P. alkylphenolica, Pseudomonas alkylphenolia, Pseudomonas alkylphenolica Mulet et al. 2015, Pseudomonas sp. KL28, strain KL28
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