STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AIL61845.1LysR family transcriptional regulator; Belongs to the LysR transcriptional regulatory family. (331 aa)    
Predicted Functional Partners:
AIL61847.1
Hypothetical protein.
 
     0.758
AIL61848.1
Endoribonuclease.
 
     0.754
AIL61849.1
FAD dependent oxidoreductase.
 
     0.749
AIL61039.1
LysR family transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.684
AIL60279.1
LysR family transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.682
AIL61844.1
Magnesium transporter, MgtC family protein.
       0.664
AIL62142.1
LysR family transcriptional regulator.
  
     0.645
AIL59515.1
LysR family transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.606
AIL63733.1
LysR family transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.592
AIL61897.1
LysR family transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.581
Your Current Organism:
Pseudomonas alkylphenolica
NCBI taxonomy Id: 237609
Other names: JCM 16553, KCTC 22206, P. alkylphenolica, Pseudomonas alkylphenolia, Pseudomonas alkylphenolica Mulet et al. 2015, Pseudomonas sp. KL28, strain KL28
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.