STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AIL62372.1Spermidine/putrescine-binding periplasmic protein. (367 aa)    
Predicted Functional Partners:
AIL64170.1
Putrescine ABC transporter, permease protein PotI.
 
 0.987
AIL64171.1
Putrescine ABC transporter permease PotH.
 
 
 0.970
potA-2
Spermidine/putrescine ABC transporter ATPase PotG; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system.
 
 
 0.967
AIL59689.1
Polyamine ABC transporter, permease protein.
  
 0.773
AIL63306.1
ABC transporter permease.
  
 0.772
AIL59688.1
Polyamine ABC transporter permease.
 
  
 0.744
AIL63305.1
ABC transporter permease.
 
  
 0.669
AIL62371.1
Carbon-nitrogen hydrolase.
       0.652
AIL63304.1
Spermidine/putrescine ABC transporter ATPase; Belongs to the ABC transporter superfamily.
 
  
 0.628
potA
Spermidine/putrescine ABC transporter ATPase subunit; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system.
 
  
 0.491
Your Current Organism:
Pseudomonas alkylphenolica
NCBI taxonomy Id: 237609
Other names: JCM 16553, KCTC 22206, P. alkylphenolica, Pseudomonas alkylphenolia, Pseudomonas alkylphenolica Mulet et al. 2015, Pseudomonas sp. KL28, strain KL28
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.