STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AIL62541.1Signal transduction histidine kinase. (482 aa)    
Predicted Functional Partners:
AIL59983.1
Two-component response regulator CbrB.
 
 0.929
AIL61244.1
Sigma-54 dependent transcriptional regulator PchR.
  
 
  0.918
AIL61940.1
Response regulator receiver protein.
  
   0.817
AIL60170.1
Multi-sensor signal transduction histidine kinase.
  
 
 
 0.772
AIL60496.1
Two component transcriptional regulator.
 
 
 0.754
AIL62996.1
Two component transcriptional regulator.
 
 
 0.741
AIL61946.1
Multicopper oxidase type 3.
  
 
 0.740
AIL60293.1
Two component transcriptional regulator.
 
 
 0.735
AIL63839.1
PAS/PAC sensor signal transduction histidine kinase.
  
 
 0.735
AIL61536.1
Two component transcriptional regulator.
 
 
 0.720
Your Current Organism:
Pseudomonas alkylphenolica
NCBI taxonomy Id: 237609
Other names: JCM 16553, KCTC 22206, P. alkylphenolica, Pseudomonas alkylphenolia, Pseudomonas alkylphenolica Mulet et al. 2015, Pseudomonas sp. KL28, strain KL28
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.