STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AIL62621.1Hypothetical protein. (1224 aa)    
Predicted Functional Partners:
AIL62622.1
Surface antigen (D15).
 
 
 0.993
AIL63008.1
Patatin.
 
 
 0.833
AIL62623.1
Histone acetyltransferase HPA2-related acetyltransferase.
 
     0.645
AIL64003.1
Cytochrome c, class II.
 
     0.632
AIL62436.1
Hypothetical protein.
  
     0.619
AIL59995.1
TPR repeat-containing protein.
  
   
 0.602
AIL59617.1
Lipopolysaccharide kinase (Kdo/WaaP) family.
  
    0.571
AIL63837.1
Lipoprotein.
  
     0.569
AIL60920.1
Phage integrase family protein.
  
     0.568
AIL64227.1
uroporphyrin-III C-methyltransferase.
 
     0.557
Your Current Organism:
Pseudomonas alkylphenolica
NCBI taxonomy Id: 237609
Other names: JCM 16553, KCTC 22206, P. alkylphenolica, Pseudomonas alkylphenolia, Pseudomonas alkylphenolica Mulet et al. 2015, Pseudomonas sp. KL28, strain KL28
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.