STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AIL62713.1Binding-protein dependent transport system inner membrane protein. (357 aa)    
Predicted Functional Partners:
AIL62714.1
ABC transporter permease.
  
 0.970
AIL62715.1
ABC transporter ATP-binding protein; Belongs to the ABC transporter superfamily.
  
 0.960
AIL62711.1
Extracellular solute-binding protein.
 
  
 0.957
AIL62712.1
Extracellular solute-binding protein.
 
  
 0.957
AIL61873.1
ABC transporter permease.
  
  
 
0.901
AIL61874.1
Peptide ABC transporter permease.
  
 0.868
AIL61872.1
ABC transporter substrate-binding protein.
 
  
 0.818
AIL61613.1
Proline betaine ABC transporter permease.
 
   
 0.591
AIL61614.1
Proline betaine ABC transporter ATP-binding protein.
 
     0.575
AIL62710.1
MltD domain-containing protein.
       0.573
Your Current Organism:
Pseudomonas alkylphenolica
NCBI taxonomy Id: 237609
Other names: JCM 16553, KCTC 22206, P. alkylphenolica, Pseudomonas alkylphenolia, Pseudomonas alkylphenolica Mulet et al. 2015, Pseudomonas sp. KL28, strain KL28
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