STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AIL62819.1Extracellular solute-binding protein. (263 aa)    
Predicted Functional Partners:
astE
Succinylglutamate desuccinylase; Transforms N(2)-succinylglutamate into succinate and glutamate; Belongs to the AspA/AstE family. Succinylglutamate desuccinylase subfamily.
  
    0.644
AIL63739.1
Hypothetical protein.
  
     0.595
AIL61598.1
Extracellular solute-binding protein.
  
     0.585
AIL62115.1
Amino acid ABC transporter substrate-binding protein, PAAT family.
  
     0.581
dnaX
DNA polymerase III subunits gamma and tau; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity.
       0.581
AIL62857.1
Hypothetical protein.
  
 
   0.580
AIL63740.1
Chromosome segregation ATPase.
  
    0.564
AIL63313.1
Hypothetical protein.
  
     0.563
AIL63738.1
Hypothetical protein.
  
     0.556
AIL63679.1
Response regulator/TPR domain-containing protein.
  
 
   0.550
Your Current Organism:
Pseudomonas alkylphenolica
NCBI taxonomy Id: 237609
Other names: JCM 16553, KCTC 22206, P. alkylphenolica, Pseudomonas alkylphenolia, Pseudomonas alkylphenolica Mulet et al. 2015, Pseudomonas sp. KL28, strain KL28
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