STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AIL63005.1AraC family transcriptional regulator. (254 aa)    
Predicted Functional Partners:
AIL61401.1
AraC family transcriptional regulator.
  
     0.736
AIL61776.1
AraC family transcriptional regulator.
  
     0.706
AIL61838.1
AraC family transcriptional regulator.
  
     0.700
AIL62383.1
AraC family transcriptional regulator.
  
     0.685
AIL61257.1
AraC family transcriptional regulator.
 
   0.672
AIL62973.1
ArgR family transcriptional regulator.
 
   0.608
AIL63004.1
Ser/Thr protein phosphatase family protein.
       0.592
AIL62471.1
AraC family transcriptional regulator.
  
     0.524
AIL59567.1
AraC family transcriptional regulator.
 
   0.519
AIL63006.1
Drug/metabolite exporter family transporter.
       0.513
Your Current Organism:
Pseudomonas alkylphenolica
NCBI taxonomy Id: 237609
Other names: JCM 16553, KCTC 22206, P. alkylphenolica, Pseudomonas alkylphenolia, Pseudomonas alkylphenolica Mulet et al. 2015, Pseudomonas sp. KL28, strain KL28
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.