STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AIL63974.1Deacetylase. (466 aa)    
Predicted Functional Partners:
AIL63975.1
Mig-14 family protein.
  
  
 0.875
AIL63976.1
Group 1 glycosyl transferase.
 
  
 0.872
AIL63977.1
Carbamoyltransferase.
 
   
 0.851
AIL63972.1
Hypothetical protein.
 
  
 0.818
AIL60549.1
Hypothetical protein.
  
   
 0.771
AIL59490.1
OprD family outer membrane porin.
  
     0.757
AIL62773.1
Lipoprotein.
  
     0.755
AIL60100.1
alginate-C5-mannuronan-epimerase AlgG.
 
     0.748
AIL64233.1
Hypothetical protein.
  
     0.744
AIL62734.1
Hypothetical protein.
  
     0.741
Your Current Organism:
Pseudomonas alkylphenolica
NCBI taxonomy Id: 237609
Other names: JCM 16553, KCTC 22206, P. alkylphenolica, Pseudomonas alkylphenolia, Pseudomonas alkylphenolica Mulet et al. 2015, Pseudomonas sp. KL28, strain KL28
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.