STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APQ11858.1Chromosome partitioning protein ParA; Derived by automated computational analysis using gene prediction method: Protein Homology. (143 aa)    
Predicted Functional Partners:
APQ11859.1
DUF4398 domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.952
APQ14547.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.797
APQ10011.1
Serine/threonine protein kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   
 0.662
APQ13992.1
Porin; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.575
APQ14457.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.565
APQ13449.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.560
APQ11093.1
Protein TolA; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
   0.548
lolA
Outer membrane lipoprotein carrier protein LolA; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane).
    
 
 0.542
APQ11988.1
Hypothetical protein; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane).
    
 
 0.542
APQ13077.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.530
Your Current Organism:
Pseudomonas psychrotolerans
NCBI taxonomy Id: 237610
Other names: CCUG 51516, DSM 15758, LMG 21977, LMG:21977, P. psychrotolerans, Pseudomonas psychrotolerans Hauser et al. 2004, Pseudomonas sp. C36, strain C36
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