STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APQ13260.1Two-component system response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (121 aa)    
Predicted Functional Partners:
APQ13261.1
Chemotaxis protein CheW; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.992
APQ13262.1
Chemotaxis protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.987
APQ13266.1
Chemotaxis protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.977
APQ13264.1
Hybrid sensor histidine kinase/response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
0.963
APQ10515.1
Adenylate cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.943
APQ13259.1
Pilus assembly protein PilG; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
0.873
APQ13309.1
Two-component sensor histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.834
APQ11750.1
PAS domain-containing sensor histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.823
APQ10848.1
ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
0.819
APQ10616.1
Two-component sensor histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.817
Your Current Organism:
Pseudomonas psychrotolerans
NCBI taxonomy Id: 237610
Other names: CCUG 51516, DSM 15758, LMG 21977, LMG:21977, P. psychrotolerans, Pseudomonas psychrotolerans Hauser et al. 2004, Pseudomonas sp. C36, strain C36
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.