STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UMAG_11213Chromosome 21, whole genome shotgun sequence. (1036 aa)    
Predicted Functional Partners:
UMAG_03702
Chromosome 10, whole genome shotgun sequence; Belongs to the RNR ribonuclease family.
    
 0.986
UMAG_10747
RNase_PH domain-containing protein.
    
  0.976
UMAG_00801
Chromosome 1, whole genome shotgun sequence.
   
 0.956
UMAG_06215
Uncharacterized protein.
   
 0.952
UMAG_10371
Chromosome 7, whole genome shotgun sequence.
    
 0.952
UMAG_00947
Uncharacterized protein.
    
 0.950
UMAG_11426
Chromosome 1, whole genome shotgun sequence.
    
 0.931
UMAG_12201
Chromosome 7, whole genome shotgun sequence.
    
 0.914
ATG1
Serine/threonine-protein kinase ATG1; Serine/threonine protein kinase involved in the cytoplasm to vacuole transport (Cvt) and found to be essential in autophagy, where it is required for the formation of autophagosomes. Involved in the clearance of protein aggregates which cannot be efficiently cleared by the proteasome. Required for selective autophagic degradation of the nucleus (nucleophagy) as well as for mitophagy which contributes to regulate mitochondrial quantity and quality by eliminating the mitochondria to a basal level to fulfill cellular energy requirements and preventing [...]
    
 0.900
UMAG_05756
Chromosome 16, whole genome shotgun sequence.
   
 0.853
Your Current Organism:
Ustilago maydis
NCBI taxonomy Id: 237631
Other names: U. maydis 521, Ustilago maydis 521
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